RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 TPM2P07951 284 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 ANKRD24Q8TF21 1146 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 CEP89Q96ST8 783 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 NME9Q86XW9 330 aa10.35□□□□□ -0.75
SCN11A-201ENST00000302328 CCDC47Q96A33 483 aaKnown RBP10.35□□□□□ -0.75
SCN11A-201ENST00000302328 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
SCN11A-201ENST00000302328 TCP11L2Q8N4U5 519 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 ADGRF5Q8IZF2 1346 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 BRMS1Q9HCU9 246 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
SCN11A-201ENST00000302328 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 FSD1Q9BTV5 496 aa10.34□□□□□ -0.75
SCN11A-201ENST00000302328 GPATCH8Q9UKJ3 1502 aaKnown RBP10.34□□□□□ -0.75
SCN11A-201ENST00000302328 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 PES1O00541 588 aaKnown RBP10.33□□□□□ -0.76
SCN11A-201ENST00000302328 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 PDE4CQ08493 712 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 DDB1Q16531 1140 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 CLASRPQ8N2M8 674 aaKnown RBP10.33□□□□□ -0.76
SCN11A-201ENST00000302328 CRBNQ96SW2 442 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 SIL1Q9H173 461 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 ACEP12821 1306 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 SURF6O75683 361 aaKnown RBP10.33□□□□□ -0.76
SCN11A-201ENST00000302328 GNAI2P04899 355 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
SCN11A-201ENST00000302328 ADAMTS8Q9UP79 889 aa10.33□□□□□ -0.76
SCN11A-201ENST00000302328 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
SCN11A-201ENST00000302328 IFNL2Q8IZJ0 200 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 RRP12Q5JTH9 1297 aaKnown RBP10.32□□□□□ -0.76
SCN11A-201ENST00000302328 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
SCN11A-201ENST00000302328 NAIPQ13075 1403 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 R3HCC1Q9Y3T6 440 aaKnown RBP10.32□□□□□ -0.76
SCN11A-201ENST00000302328 REC8O95072 547 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 XBP1P17861 261 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 ERICH6BQ5W0A0 696 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 NOC3LQ8WTT2 800 aaKnown RBP10.32□□□□□ -0.76
SCN11A-201ENST00000302328 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
SCN11A-201ENST00000302328 BRD4O60885 1362 aaPredicted RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 SAFBQ15424 915 aaKnown RBP eCLIP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
SCN11A-201ENST00000302328 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
SCN11A-201ENST00000302328 RAI14Q9P0K7 980 aa10.31□□□□□ -0.76
SCN11A-201ENST00000302328 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SCN11A-201ENST00000302328 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 RRP1P56182 461 aaKnown RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 MPHOSPH10O00566 681 aaKnown RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 FCHSD2O94868 740 aa10.31□□□□□ -0.76
SCN11A-201ENST00000302328 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
SCN11A-201ENST00000302328 EXOSC9Q06265 439 aaKnown RBP10.3□□□□□ -0.76
SCN11A-201ENST00000302328 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
SCN11A-201ENST00000302328 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
SCN11A-201ENST00000302328 CHD1O14646 1710 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 FMNL2Q96PY5 1086 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 TFCP2L1Q9NZI6 479 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 PARP3Q9Y6F1 533 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
SCN11A-201ENST00000302328 HIP1O00291 1037 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 TRAPPC8Q9Y2L5 1435 aa10.3□□□□□ -0.76
SCN11A-201ENST00000302328 C14orf93Q9H972 538 aaKnown RBP10.3□□□□□ -0.76
SCN11A-201ENST00000302328 TRMT112Q9UI30 125 aaKnown RBP10.29□□□□□ -0.76
SCN11A-201ENST00000302328 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
SCN11A-201ENST00000302328 MYD88Q99836 296 aa10.29□□□□□ -0.76
SCN11A-201ENST00000302328 TAF7Q15545 349 aaPredicted RBP10.29□□□□□ -0.76
SCN11A-201ENST00000302328 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
SCN11A-201ENST00000302328 MAP3K1Q13233 1512 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 LRP2BPQ9P2M1 347 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 NOB1Q9ULX3 412 aaKnown RBP10.28□□□□□ -0.76
SCN11A-201ENST00000302328 TTC21BQ7Z4L5 1316 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 METTL24Q5JXM2 366 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 CABLES1Q8TDN4 633 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 NUP160Q12769 1436 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 KDM4AO75164 1064 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 FOSBP53539 338 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 DDX46Q7L014 1031 aaKnown RBP10.28□□□□□ -0.76
SCN11A-201ENST00000302328 MIS18AQ9NYP9 233 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
SCN11A-201ENST00000302328 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCN11A-201ENST00000302328 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
SCN11A-201ENST00000302328 C6orf229H3BNL8 230 aa10.27□□□□□ -0.76
SCN11A-201ENST00000302328 CRACR2BQ8N4Y2 399 aaPredicted RBP10.27□□□□□ -0.76
SCN11A-201ENST00000302328 USP21Q9UK80 565 aa10.27□□□□□ -0.76
SCN11A-201ENST00000302328 GRM1Q13255 1194 aa10.27□□□□□ -0.77
SCN11A-201ENST00000302328 MCM10Q7L590 875 aa10.27□□□□□ -0.77
SCN11A-201ENST00000302328 TSR2Q969E8 191 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms