RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
PDGFD-201ENST00000302251 ZNF830Q96NB3 372 aaPredicted RBP14.72□□□□□ -0.05
PDGFD-201ENST00000302251 LARP6Q9BRS8 491 aaKnown RBP14.72□□□□□ -0.05
PDGFD-201ENST00000302251 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
PDGFD-201ENST00000302251 CLTCL1P53675 1640 aa14.72□□□□□ -0.05
PDGFD-201ENST00000302251 MAP4K4O95819 1239 aaPredicted RBP14.71□□□□□ -0.05
PDGFD-201ENST00000302251 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
PDGFD-201ENST00000302251 GAS2L2Q8NHY3 880 aa14.71□□□□□ -0.05
PDGFD-201ENST00000302251 MROH2AA6NES4 1674 aa14.71□□□□□ -0.05
PDGFD-201ENST00000302251 EIF2AK4Q9P2K8 1649 aaKnown RBP14.71□□□□□ -0.05
PDGFD-201ENST00000302251 COG3Q96JB2 828 aa14.71□□□□□ -0.05
PDGFD-201ENST00000302251 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
PDGFD-201ENST00000302251 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.06
PDGFD-201ENST00000302251 BECN2A8MW95 431 aa14.7□□□□□ -0.06
PDGFD-201ENST00000302251 GOLGA6L19H0YKK7 550 aa14.7□□□□□ -0.06
PDGFD-201ENST00000302251 TNNT3P45378 269 aaPredicted RBP14.7□□□□□ -0.06
PDGFD-201ENST00000302251 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
PDGFD-201ENST00000302251 BICD2Q8TD16 824 aa14.7□□□□□ -0.06
PDGFD-201ENST00000302251 DIAPH3Q9NSV4 1193 aa14.7□□□□□ -0.06
PDGFD-201ENST00000302251 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
PDGFD-201ENST00000302251 MTERF4Q7Z6M4 381 aaKnown RBP14.69□□□□□ -0.06
PDGFD-201ENST00000302251 EXOC6BQ9Y2D4 811 aa14.69□□□□□ -0.06
PDGFD-201ENST00000302251 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
PDGFD-201ENST00000302251 ERC2O15083 957 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
PDGFD-201ENST00000302251 CWC22Q9HCG8 908 aaKnown RBP14.68□□□□□ -0.06
PDGFD-201ENST00000302251 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 USP25Q9UHP3 1055 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 ARAP3Q8WWN8 1544 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 AMPHP49418 695 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 KLHL40Q2TBA0 621 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 ZSCAN23Q3MJ62 389 aa14.68□□□□□ -0.06
PDGFD-201ENST00000302251 ZC3H13Q5T200 1668 aaKnown RBP14.68□□□□□ -0.06
PDGFD-201ENST00000302251 A0A0G2JS52 829 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 DDX54Q8TDD1 881 aaKnown RBP14.67□□□□□ -0.06
PDGFD-201ENST00000302251 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 TRIM5Q9C035 493 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 GAS2L3Q86XJ1 694 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 C16orf71Q8IYS4 520 aaPredicted RBP14.67□□□□□ -0.06
PDGFD-201ENST00000302251 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 NEURL4Q96JN8 1562 aa14.67□□□□□ -0.06
PDGFD-201ENST00000302251 H3BQV1 296 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 TSPYL4Q9UJ04 414 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 CCAR2Q8N163 923 aaKnown RBP14.66□□□□□ -0.06
PDGFD-201ENST00000302251 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
PDGFD-201ENST00000302251 TRPM2O94759 1503 aa14.65□□□□□ -0.06
PDGFD-201ENST00000302251 IGSF3O75054 1194 aa14.65□□□□□ -0.06
PDGFD-201ENST00000302251 HMGN5P82970 282 aaKnown RBP14.65□□□□□ -0.06
PDGFD-201ENST00000302251 TET3O43151 1660 aa14.65□□□□□ -0.06
PDGFD-201ENST00000302251 INSRP06213 1382 aa14.65□□□□□ -0.06
PDGFD-201ENST00000302251 CT47B1P0C2W7 299 aaPredicted RBP14.65□□□□□ -0.06
PDGFD-201ENST00000302251 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
PDGFD-201ENST00000302251 SURF6O75683 361 aaKnown RBP14.65□□□□□ -0.06
PDGFD-201ENST00000302251 ZGPATQ8N5A5 531 aaKnown RBP14.64□□□□□ -0.07
PDGFD-201ENST00000302251 CEBPZQ03701 1054 aaKnown RBP14.64□□□□□ -0.07
PDGFD-201ENST00000302251 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
PDGFD-201ENST00000302251 NUCB1Q02818 461 aa14.64□□□□□ -0.07
PDGFD-201ENST00000302251 SF3A1Q15459 793 aaKnown RBP14.64□□□□□ -0.07
PDGFD-201ENST00000302251 PLCH2O75038 1416 aa14.64□□□□□ -0.07
PDGFD-201ENST00000302251 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
PDGFD-201ENST00000302251 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
PDGFD-201ENST00000302251 FAM184AQ8NB25 1140 aa14.63□□□□□ -0.07
PDGFD-201ENST00000302251 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
PDGFD-201ENST00000302251 ZKSCAN1P17029 563 aaPredicted RBP14.63□□□□□ -0.07
PDGFD-201ENST00000302251 TPD52L1Q16890 204 aaPredicted RBP14.63□□□□□ -0.07
PDGFD-201ENST00000302251 FERMT3Q86UX7 667 aa14.63□□□□□ -0.07
PDGFD-201ENST00000302251 HDAC1Q13547 482 aaPredicted RBP14.62□□□□□ -0.07
PDGFD-201ENST00000302251 GNL2Q13823 731 aaKnown RBP14.62□□□□□ -0.07
PDGFD-201ENST00000302251 HTATSF1O43719 755 aaKnown RBP14.62□□□□□ -0.07
PDGFD-201ENST00000302251 SULT6B1Q6IMI4 303 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 SASS6Q6UVJ0 657 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 PTPRTO14522 1441 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 CHAMP1Q96JM3 812 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 SYNMO15061 1565 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 MYO3AQ8NEV4 1616 aa14.62□□□□□ -0.07
PDGFD-201ENST00000302251 CAMK4Q16566 473 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
PDGFD-201ENST00000302251 TTC12Q9H892 705 aaPredicted RBP14.61□□□□□ -0.07
PDGFD-201ENST00000302251 F6X3S4 739 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 DTNBO60941 627 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 HOMER1Q86YM7 354 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 GPATCH3Q96I76 525 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
PDGFD-201ENST00000302251 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
PDGFD-201ENST00000302251 CREBRFQ8IUR6 639 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 SMC5Q8IY18 1101 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 PDCL2Q8N4E4 241 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 RBSNQ9H1K0 784 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 SIGLEC1Q9BZZ2 1709 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 OFD1O75665 1012 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
PDGFD-201ENST00000302251 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms