RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 AGLP35573 1532 aa16.29■□□□□ 0.2
HIF3A-204ENST00000300862 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
HIF3A-204ENST00000300862 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
HIF3A-204ENST00000300862 RIMBP3CA6NJZ7 1639 aa16.29■□□□□ 0.2
HIF3A-204ENST00000300862 RIMBP3BA6NNM3 1639 aa16.29■□□□□ 0.2
HIF3A-204ENST00000300862 RIMBP3Q9UFD9 1639 aa16.29■□□□□ 0.2
HIF3A-204ENST00000300862 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
HIF3A-204ENST00000300862 CPS1P31327 1500 aa16.28■□□□□ 0.2
HIF3A-204ENST00000300862 PRR36Q9H6K5 1346 aa16.28■□□□□ 0.2
HIF3A-204ENST00000300862 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
HIF3A-204ENST00000300862 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.2
HIF3A-204ENST00000300862 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
HIF3A-204ENST00000300862 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
HIF3A-204ENST00000300862 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.19
HIF3A-204ENST00000300862 NRXN3Q9Y4C0 1643 aa16.26■□□□□ 0.19
HIF3A-204ENST00000300862 SOX12O15370 315 aa16.26■□□□□ 0.19
HIF3A-204ENST00000300862 GNAI1P63096 354 aa16.26■□□□□ 0.19
HIF3A-204ENST00000300862 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
HIF3A-204ENST00000300862 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-204ENST00000300862 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
HIF3A-204ENST00000300862 NUCB1Q02818 461 aa16.25■□□□□ 0.19
HIF3A-204ENST00000300862 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-204ENST00000300862 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
HIF3A-204ENST00000300862 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
HIF3A-204ENST00000300862 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
HIF3A-204ENST00000300862 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
HIF3A-204ENST00000300862 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
HIF3A-204ENST00000300862 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
HIF3A-204ENST00000300862 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
HIF3A-204ENST00000300862 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
HIF3A-204ENST00000300862 ROBO2Q9HCK4 1378 aa16.23■□□□□ 0.19
HIF3A-204ENST00000300862 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
HIF3A-204ENST00000300862 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
HIF3A-204ENST00000300862 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
HIF3A-204ENST00000300862 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
HIF3A-204ENST00000300862 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-204ENST00000300862 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
HIF3A-204ENST00000300862 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
HIF3A-204ENST00000300862 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
HIF3A-204ENST00000300862 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.18
HIF3A-204ENST00000300862 TNRQ92752 1358 aa16.2■□□□□ 0.18
HIF3A-204ENST00000300862 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
HIF3A-204ENST00000300862 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
HIF3A-204ENST00000300862 ACEP12821 1306 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 LTKP29376 864 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 MCM10Q7L590 875 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 ARHGAP45Q92619 1136 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-204ENST00000300862 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-204ENST00000300862 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
HIF3A-204ENST00000300862 ABCC4O15439 1325 aa16.18■□□□□ 0.18
HIF3A-204ENST00000300862 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
HIF3A-204ENST00000300862 TMEM2Q9UHN6 1383 aa16.18■□□□□ 0.18
HIF3A-204ENST00000300862 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
HIF3A-204ENST00000300862 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
HIF3A-204ENST00000300862 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
HIF3A-204ENST00000300862 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
HIF3A-204ENST00000300862 TECPR2O15040 1411 aa16.16■□□□□ 0.18
HIF3A-204ENST00000300862 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
HIF3A-204ENST00000300862 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
HIF3A-204ENST00000300862 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
HIF3A-204ENST00000300862 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
HIF3A-204ENST00000300862 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
HIF3A-204ENST00000300862 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
HIF3A-204ENST00000300862 BMP2KLQ5H9B9 411 aa16.14■□□□□ 0.17
HIF3A-204ENST00000300862 C3P01024 1663 aa16.13■□□□□ 0.17
HIF3A-204ENST00000300862 FOXO3O43524 673 aa16.13■□□□□ 0.17
HIF3A-204ENST00000300862 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
HIF3A-204ENST00000300862 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
HIF3A-204ENST00000300862 ARXQ96QS3 562 aa16.12■□□□□ 0.17
HIF3A-204ENST00000300862 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
HIF3A-204ENST00000300862 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
HIF3A-204ENST00000300862 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
HIF3A-204ENST00000300862 APBB1O00213 710 aa16.11■□□□□ 0.17
HIF3A-204ENST00000300862 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
HIF3A-204ENST00000300862 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-204ENST00000300862 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-204ENST00000300862 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
HIF3A-204ENST00000300862 CHL1O00533 1208 aa16.1■□□□□ 0.17
HIF3A-204ENST00000300862 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
HIF3A-204ENST00000300862 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
HIF3A-204ENST00000300862 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 USP6P35125 1406 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 MCM4P33991 863 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
HIF3A-204ENST00000300862 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 OVOS2A0A0J9YW53 1432 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 OVOS2Q6IE36 1432 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
HIF3A-204ENST00000300862 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.17
HIF3A-204ENST00000300862 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.16
HIF3A-204ENST00000300862 CD2BP2O95400 341 aaKnown RBP16.08■□□□□ 0.16
HIF3A-204ENST00000300862 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
HIF3A-204ENST00000300862 KIF2CQ99661 725 aa16.08■□□□□ 0.16
HIF3A-204ENST00000300862 OTUD7AQ8TE49 926 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-204ENST00000300862 KIF13AQ9H1H9 1805 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms