RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 ANKRD24Q8TF21 1146 aa10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 INSRP06213 1382 aa10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 NGLY1Q96IV0 654 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 G3V3G9 751 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 DDX54Q8TDD1 881 aaKnown RBP10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 EXOC5O00471 708 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 ATP7BP35670 1465 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 STARD3NLO95772 234 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 SLFN5Q08AF3 891 aa10.29□□□□□ -0.76
SNRPD1-201ENST00000300413 MAP3K4Q9Y6R4 1608 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 CFAP65Q6ZU64 1925 aaKnown RBP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 CRBNQ96SW2 442 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 NKTRP30414 1462 aaKnown RBP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 CCDC27Q2M243 656 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 CLTCL1P53675 1640 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 LAMC1P11047 1609 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 HSCBQ8IWL3 235 aa10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
SNRPD1-201ENST00000300413 SBNO1A3KN83 1393 aa10.27□□□□□ -0.76
SNRPD1-201ENST00000300413 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.76
SNRPD1-201ENST00000300413 APBB1O00213 710 aa10.27□□□□□ -0.76
SNRPD1-201ENST00000300413 SOS1Q07889 1333 aaPredicted RBP10.27□□□□□ -0.77
SNRPD1-201ENST00000300413 MSH5O43196 834 aa10.27□□□□□ -0.77
SNRPD1-201ENST00000300413 IP6K1Q92551 441 aa10.27□□□□□ -0.77
SNRPD1-201ENST00000300413 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
SNRPD1-201ENST00000300413 GCP02774 474 aa10.26□□□□□ -0.77
SNRPD1-201ENST00000300413 RUFY2Q8WXA3 655 aa10.26□□□□□ -0.77
SNRPD1-201ENST00000300413 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
SNRPD1-201ENST00000300413 METP08581 1390 aa10.26□□□□□ -0.77
SNRPD1-201ENST00000300413 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 ERC2O15083 957 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 ATF7IPQ6VMQ6 1270 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 ADAMTS2O95450 1211 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 SLC4A2P04920 1241 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 SRCIN1Q9C0H9 1055 aa10.25□□□□□ -0.77
SNRPD1-201ENST00000300413 FRAT2O75474 233 aaPredicted RBP10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 SETBP1Q9Y6X0 1596 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 TMEM94Q12767 1356 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 CEP152O94986 1710 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 ANKRD45Q5TZF3 282 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 FMNL2Q96PY5 1086 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 GNAI2P04899 355 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 E9PCH4 1651 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 GCC1Q96CN9 775 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 KIF24Q5T7B8 1368 aa10.24□□□□□ -0.77
SNRPD1-201ENST00000300413 PLIN1O60240 522 aa10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 CDCA7LQ96GN5 454 aa10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 CARD14Q9BXL6 1004 aa10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 AIMP1Q12904 312 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 CLTCQ00610 1675 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 EIF4A2Q14240 407 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 ZCRB1Q8TBF4 217 aaKnown RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 SMARCC1Q92922 1105 aaPredicted RBP10.23□□□□□ -0.77
SNRPD1-201ENST00000300413 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 PTPRCP08575 1304 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 NEURL4Q96JN8 1562 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 NOL10Q9BSC4 688 aaKnown RBP10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 HOXC9P31274 260 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 DUSP27Q5VZP5 1158 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 IL2RBP14784 551 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 HSP90AB2PQ58FF8 381 aa10.22□□□□□ -0.77
SNRPD1-201ENST00000300413 AATKQ6ZMQ8 1374 aa10.21□□□□□ -0.77
SNRPD1-201ENST00000300413 LARP1Q6PKG0 1096 aaKnown RBP10.21□□□□□ -0.77
SNRPD1-201ENST00000300413 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
SNRPD1-201ENST00000300413 MAP3K19Q56UN5 1328 aa10.21□□□□□ -0.78
SNRPD1-201ENST00000300413 REC8O95072 547 aa10.21□□□□□ -0.78
SNRPD1-201ENST00000300413 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.78
SNRPD1-201ENST00000300413 CCDC184Q52MB2 194 aa10.21□□□□□ -0.78
SNRPD1-201ENST00000300413 RTL1A6NKG5 1358 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 A0A087WZG4 1122 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms