RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 MCM5P33992 734 aa15.98■□□□□ 0.15
TVP23A-201ENST00000299866 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
TVP23A-201ENST00000299866 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
TVP23A-201ENST00000299866 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
TVP23A-201ENST00000299866 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
TVP23A-201ENST00000299866 CWC22Q9HCG8 908 aaKnown RBP15.98■□□□□ 0.15
TVP23A-201ENST00000299866 ST18O60284 1047 aa15.97■□□□□ 0.15
TVP23A-201ENST00000299866 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
TVP23A-201ENST00000299866 TSPYL6Q8N831 410 aa15.97■□□□□ 0.15
TVP23A-201ENST00000299866 ATAD2Q6PL18 1390 aa15.97■□□□□ 0.15
TVP23A-201ENST00000299866 ZNF830Q96NB3 372 aaPredicted RBP15.96■□□□□ 0.15
TVP23A-201ENST00000299866 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
TVP23A-201ENST00000299866 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
TVP23A-201ENST00000299866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.96■□□□□ 0.15
TVP23A-201ENST00000299866 KIAA1210Q9ULL0 1709 aa15.96■□□□□ 0.14
TVP23A-201ENST00000299866 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 KIAA2012Q0VF49 1180 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
TVP23A-201ENST00000299866 PLCH2O75038 1416 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 ADGRL1O94910 1474 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
TVP23A-201ENST00000299866 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
TVP23A-201ENST00000299866 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
TVP23A-201ENST00000299866 ADGRB2O60241 1585 aa15.95■□□□□ 0.14
TVP23A-201ENST00000299866 MYOM2P54296 1465 aa15.94■□□□□ 0.14
TVP23A-201ENST00000299866 VAMP4O75379 141 aa15.94■□□□□ 0.14
TVP23A-201ENST00000299866 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
TVP23A-201ENST00000299866 CBX1P83916 185 aa15.93■□□□□ 0.14
TVP23A-201ENST00000299866 TSPY26PQ9H489 355 aa15.93■□□□□ 0.14
TVP23A-201ENST00000299866 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
TVP23A-201ENST00000299866 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
TVP23A-201ENST00000299866 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
TVP23A-201ENST00000299866 ARHGAP31Q2M1Z3 1444 aa15.92■□□□□ 0.14
TVP23A-201ENST00000299866 SMARCA5O60264 1052 aaPredicted RBP15.92■□□□□ 0.14
TVP23A-201ENST00000299866 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
TVP23A-201ENST00000299866 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
TVP23A-201ENST00000299866 SDSP20132 328 aa15.92■□□□□ 0.14
TVP23A-201ENST00000299866 FBLN1P23142 703 aa15.91■□□□□ 0.14
TVP23A-201ENST00000299866 CASC1Q6TDU7 716 aa15.91■□□□□ 0.14
TVP23A-201ENST00000299866 MYRIPQ8NFW9 859 aa15.91■□□□□ 0.14
TVP23A-201ENST00000299866 MBD3O95983 291 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 HMOX1P09601 288 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 GDPD2Q9HCC8 539 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 STK26Q9P289 416 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 NSD2O96028 1365 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 NEK4P51957 841 aa15.9■□□□□ 0.14
TVP23A-201ENST00000299866 MED14O60244 1454 aa15.89■□□□□ 0.13
TVP23A-201ENST00000299866 DMTNQ08495 405 aa15.89■□□□□ 0.13
TVP23A-201ENST00000299866 TTC12Q9H892 705 aaPredicted RBP15.89■□□□□ 0.13
TVP23A-201ENST00000299866 ARHGAP45Q92619 1136 aa15.89■□□□□ 0.13
TVP23A-201ENST00000299866 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
TVP23A-201ENST00000299866 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
TVP23A-201ENST00000299866 TET3O43151 1660 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 FYB1O15117 783 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-201ENST00000299866 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 A0A1W2PP64 1363 aa15.88■□□□□ 0.13
TVP23A-201ENST00000299866 ABCC1P33527 1531 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 PLCB2Q00722 1185 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
TVP23A-201ENST00000299866 TMX3Q96JJ7 454 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
TVP23A-201ENST00000299866 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 ABCC4O15439 1325 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 REC8O95072 547 aa15.87■□□□□ 0.13
TVP23A-201ENST00000299866 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
TVP23A-201ENST00000299866 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
TVP23A-201ENST00000299866 MYO3AQ8NEV4 1616 aa15.86■□□□□ 0.13
TVP23A-201ENST00000299866 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
TVP23A-201ENST00000299866 C8orf58Q8NAV2 365 aa15.86■□□□□ 0.13
TVP23A-201ENST00000299866 MBIPQ9NS73 344 aa15.86■□□□□ 0.13
TVP23A-201ENST00000299866 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
TVP23A-201ENST00000299866 API5Q9BZZ5 524 aaKnown RBP15.86■□□□□ 0.13
TVP23A-201ENST00000299866 FCHSD2O94868 740 aa15.85■□□□□ 0.13
TVP23A-201ENST00000299866 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
TVP23A-201ENST00000299866 ERC2O15083 957 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 ATP2B3Q16720 1220 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 GNAI1P63096 354 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
TVP23A-201ENST00000299866 PRIMPOLQ96LW4 560 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 PTCH1Q13635 1447 aa15.84■□□□□ 0.13
TVP23A-201ENST00000299866 PIK3R4Q99570 1358 aa15.83■□□□□ 0.13
TVP23A-201ENST00000299866 BRD1O95696 1058 aa15.83■□□□□ 0.13
TVP23A-201ENST00000299866 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.13
TVP23A-201ENST00000299866 KIF3AQ9Y496 699 aa15.83■□□□□ 0.13
TVP23A-201ENST00000299866 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.12
TVP23A-201ENST00000299866 ADCY5O95622 1261 aa15.83■□□□□ 0.12
TVP23A-201ENST00000299866 NFE2L2Q16236 605 aa15.83■□□□□ 0.12
TVP23A-201ENST00000299866 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
TVP23A-201ENST00000299866 KIF1BO60333 1816 aa15.83■□□□□ 0.12
TVP23A-201ENST00000299866 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
TVP23A-201ENST00000299866 MINK1Q8N4C8 1332 aaPredicted RBP15.82■□□□□ 0.12
TVP23A-201ENST00000299866 MROH2AA6NES4 1674 aa15.82■□□□□ 0.12
TVP23A-201ENST00000299866 IGSF3O75054 1194 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms