RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
RPUSD4-201ENST00000298317 EFCAB6Q5THR3 1501 aa16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
RPUSD4-201ENST00000298317 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
RPUSD4-201ENST00000298317 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
RPUSD4-201ENST00000298317 ZNF428Q96B54 188 aa16.62■□□□□ 0.25
RPUSD4-201ENST00000298317 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
RPUSD4-201ENST00000298317 FANCAO15360 1455 aa16.62■□□□□ 0.25
RPUSD4-201ENST00000298317 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
RPUSD4-201ENST00000298317 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
RPUSD4-201ENST00000298317 CFAP44Q96MT7 982 aa16.61■□□□□ 0.25
RPUSD4-201ENST00000298317 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
RPUSD4-201ENST00000298317 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
RPUSD4-201ENST00000298317 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 C14orf93Q9H972 538 aaKnown RBP16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
RPUSD4-201ENST00000298317 PPLO60437 1756 aa16.59■□□□□ 0.25
RPUSD4-201ENST00000298317 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
RPUSD4-201ENST00000298317 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
RPUSD4-201ENST00000298317 USP26Q9BXU7 913 aa16.59■□□□□ 0.25
RPUSD4-201ENST00000298317 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
RPUSD4-201ENST00000298317 SYCE3A1L190 88 aa16.58■□□□□ 0.24
RPUSD4-201ENST00000298317 UTP14CQ5TAP6 766 aaKnown RBP16.57■□□□□ 0.24
RPUSD4-201ENST00000298317 PLEKHM2Q8IWE5 1019 aa16.57■□□□□ 0.24
RPUSD4-201ENST00000298317 ABCC4O15439 1325 aa16.57■□□□□ 0.24
RPUSD4-201ENST00000298317 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
RPUSD4-201ENST00000298317 KIF3BO15066 747 aa16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 TTC22Q5TAA0 569 aa16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
RPUSD4-201ENST00000298317 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 MYRIPQ8NFW9 859 aa16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 GLI2P10070 1586 aa16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 MBD3O95983 291 aa16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 DMTNQ08495 405 aa16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 KIAA2012Q0VF49 1180 aa16.55■□□□□ 0.24
RPUSD4-201ENST00000298317 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 CDC42BPGQ6DT37 1551 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 ST18O60284 1047 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 ARID3AQ99856 593 aa16.54■□□□□ 0.24
RPUSD4-201ENST00000298317 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
RPUSD4-201ENST00000298317 VAMP4O75379 141 aa16.53■□□□□ 0.24
RPUSD4-201ENST00000298317 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
RPUSD4-201ENST00000298317 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
RPUSD4-201ENST00000298317 ZSCAN20P17040 1043 aaPredicted RBP16.52■□□□□ 0.24
RPUSD4-201ENST00000298317 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
RPUSD4-201ENST00000298317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPUSD4-201ENST00000298317 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 CHAMP1Q96JM3 812 aa16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
RPUSD4-201ENST00000298317 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 KIF24Q5T7B8 1368 aa16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
RPUSD4-201ENST00000298317 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
RPUSD4-201ENST00000298317 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
RPUSD4-201ENST00000298317 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
RPUSD4-201ENST00000298317 FCHSD2O94868 740 aa16.48■□□□□ 0.23
RPUSD4-201ENST00000298317 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
RPUSD4-201ENST00000298317 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
RPUSD4-201ENST00000298317 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
RPUSD4-201ENST00000298317 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
RPUSD4-201ENST00000298317 BRD1O95696 1058 aa16.47■□□□□ 0.23
RPUSD4-201ENST00000298317 SDSP20132 328 aa16.47■□□□□ 0.23
RPUSD4-201ENST00000298317 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
RPUSD4-201ENST00000298317 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 FYB1O15117 783 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 ATP10DQ9P241 1426 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
RPUSD4-201ENST00000298317 REC8O95072 547 aa16.46■□□□□ 0.22
RPUSD4-201ENST00000298317 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.22
RPUSD4-201ENST00000298317 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.22
RPUSD4-201ENST00000298317 CHD1O14646 1710 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms