RNA–Protein interactions for RNA: ENST00000298282.13

PKNOX2-201, Transcript of PBX/knotted 1 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX2, Length 3,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-201ENST00000298282 TXNDC2Q86VQ3 553 aa13.6□□□□□ -0.23
PKNOX2-201ENST00000298282 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
PKNOX2-201ENST00000298282 XRCC6P12956 609 aaKnown RBP eCLIP13.6□□□□□ -0.23
PKNOX2-201ENST00000298282 LTKP29376 864 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 HSP90AA1P07900 732 aaKnown RBP13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 ZNF428Q96B54 188 aa13.59□□□□□ -0.23
PKNOX2-201ENST00000298282 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
PKNOX2-201ENST00000298282 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
PKNOX2-201ENST00000298282 USP6P35125 1406 aa13.58□□□□□ -0.24
PKNOX2-201ENST00000298282 IGHDP01880 384 aa13.57□□□□□ -0.24
PKNOX2-201ENST00000298282 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
PKNOX2-201ENST00000298282 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
PKNOX2-201ENST00000298282 PANK1Q8TE04 598 aa13.57□□□□□ -0.24
PKNOX2-201ENST00000298282 RLBP1P12271 317 aa13.56□□□□□ -0.24
PKNOX2-201ENST00000298282 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
PKNOX2-201ENST00000298282 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
PKNOX2-201ENST00000298282 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
PKNOX2-201ENST00000298282 PMFBP1Q8TBY8 1022 aa13.56□□□□□ -0.24
PKNOX2-201ENST00000298282 CLCN1P35523 988 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 RGS3P49796 1198 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 RIPK4P57078 832 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 NME9Q86XW9 330 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 NFE2L2Q16236 605 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 USP19O94966 1318 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 CEP170BQ9Y4F5 1589 aaPredicted RBP13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
PKNOX2-201ENST00000298282 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 CHD2O14647 1828 aaKnown RBP13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 COG3Q96JB2 828 aa13.54□□□□□ -0.24
PKNOX2-201ENST00000298282 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
PKNOX2-201ENST00000298282 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
PKNOX2-201ENST00000298282 SEC24BO95487 1268 aa13.53□□□□□ -0.24
PKNOX2-201ENST00000298282 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
PKNOX2-201ENST00000298282 PRKAR2BP31323 418 aa13.52□□□□□ -0.24
PKNOX2-201ENST00000298282 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.24
PKNOX2-201ENST00000298282 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 SLKQ9H2G2 1235 aaPredicted RBP13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
PKNOX2-201ENST00000298282 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
PKNOX2-201ENST00000298282 ACEP12821 1306 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 TRIM27P14373 513 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
PKNOX2-201ENST00000298282 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
PKNOX2-201ENST00000298282 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
PKNOX2-201ENST00000298282 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
PKNOX2-201ENST00000298282 KIF24Q5T7B8 1368 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 FBLN1P23142 703 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 GNAI1P63096 354 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 FGD1P98174 961 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 SMC4Q9NTJ3 1288 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 AMOTL2Q9Y2J4 779 aa13.48□□□□□ -0.25
PKNOX2-201ENST00000298282 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
PKNOX2-201ENST00000298282 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
PKNOX2-201ENST00000298282 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
PKNOX2-201ENST00000298282 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
PKNOX2-201ENST00000298282 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
PKNOX2-201ENST00000298282 VAMP4O75379 141 aa13.46□□□□□ -0.25
PKNOX2-201ENST00000298282 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
PKNOX2-201ENST00000298282 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
PKNOX2-201ENST00000298282 KDRP35968 1356 aa13.46□□□□□ -0.25
PKNOX2-201ENST00000298282 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.26
PKNOX2-201ENST00000298282 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
PKNOX2-201ENST00000298282 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
PKNOX2-201ENST00000298282 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
PKNOX2-201ENST00000298282 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
PKNOX2-201ENST00000298282 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
PKNOX2-201ENST00000298282 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
PKNOX2-201ENST00000298282 HMOX1P09601 288 aa13.43□□□□□ -0.26
PKNOX2-201ENST00000298282 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
PKNOX2-201ENST00000298282 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
PKNOX2-201ENST00000298282 KIAA0232Q92628 1395 aa13.43□□□□□ -0.26
PKNOX2-201ENST00000298282 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
PKNOX2-201ENST00000298282 ABCC4O15439 1325 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms