RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 EXOSC9Q06265 439 aaKnown RBP15.69■□□□□ 0.1
CAGE1-201ENST00000296742 AMOTL2Q9Y2J4 779 aa15.69■□□□□ 0.1
CAGE1-201ENST00000296742 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
CAGE1-201ENST00000296742 COG3Q96JB2 828 aa15.68■□□□□ 0.1
CAGE1-201ENST00000296742 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
CAGE1-201ENST00000296742 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
CAGE1-201ENST00000296742 CPS1P31327 1500 aa15.67■□□□□ 0.1
CAGE1-201ENST00000296742 ACEP12821 1306 aa15.66■□□□□ 0.1
CAGE1-201ENST00000296742 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
CAGE1-201ENST00000296742 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
CAGE1-201ENST00000296742 PTPRUQ92729 1446 aa15.66■□□□□ 0.1
CAGE1-201ENST00000296742 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
CAGE1-201ENST00000296742 ATP7BP35670 1465 aa15.65■□□□□ 0.1
CAGE1-201ENST00000296742 PNPLA6Q8IY17 1366 aa15.65■□□□□ 0.1
CAGE1-201ENST00000296742 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
CAGE1-201ENST00000296742 MFAP1P55081 439 aaKnown RBP15.64■□□□□ 0.09
CAGE1-201ENST00000296742 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
CAGE1-201ENST00000296742 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
CAGE1-201ENST00000296742 MED14O60244 1454 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 FAM135BQ49AJ0 1406 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
CAGE1-201ENST00000296742 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 PLEKHG1Q9ULL1 1385 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 FCHSD2O94868 740 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 PCDHB15Q9Y5E8 787 aa15.63■□□□□ 0.09
CAGE1-201ENST00000296742 TPM2P07951 284 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 FAM83GA6ND36 823 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 IL13P35225 146 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 NUTM2GQ5VZR2 741 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 KIAA1211Q6ZU35 1233 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 PDCL3Q9H2J4 239 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 TECPR2O15040 1411 aa15.62■□□□□ 0.09
CAGE1-201ENST00000296742 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.61■□□□□ 0.09
CAGE1-201ENST00000296742 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
CAGE1-201ENST00000296742 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
CAGE1-201ENST00000296742 THEMISQ8N1K5 641 aaPredicted RBP15.61■□□□□ 0.09
CAGE1-201ENST00000296742 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
CAGE1-201ENST00000296742 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 C3P01024 1663 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 GAS2L3Q86XJ1 694 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 KCNA6P17658 529 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
CAGE1-201ENST00000296742 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
CAGE1-201ENST00000296742 HSCBQ8IWL3 235 aa15.59■□□□□ 0.09
CAGE1-201ENST00000296742 ADGRB2O60241 1585 aa15.59■□□□□ 0.09
CAGE1-201ENST00000296742 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
CAGE1-201ENST00000296742 HSP90AB2PQ58FF8 381 aa15.59■□□□□ 0.09
CAGE1-201ENST00000296742 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
CAGE1-201ENST00000296742 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
CAGE1-201ENST00000296742 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.09
CAGE1-201ENST00000296742 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
CAGE1-201ENST00000296742 RBM10P98175 930 aaKnown RBP15.57■□□□□ 0.08
CAGE1-201ENST00000296742 ISY1Q9ULR0 285 aaKnown RBP15.57■□□□□ 0.08
CAGE1-201ENST00000296742 NOB1Q9ULX3 412 aaKnown RBP15.57■□□□□ 0.08
CAGE1-201ENST00000296742 SULT6B1Q6IMI4 303 aa15.57■□□□□ 0.08
CAGE1-201ENST00000296742 TRIM27P14373 513 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 NFE2L2Q16236 605 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 TSPYL6Q8N831 410 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
CAGE1-201ENST00000296742 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
CAGE1-201ENST00000296742 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
CAGE1-201ENST00000296742 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
CAGE1-201ENST00000296742 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
CAGE1-201ENST00000296742 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
CAGE1-201ENST00000296742 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
CAGE1-201ENST00000296742 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
CAGE1-201ENST00000296742 C14orf37Q86TY3 774 aa15.53■□□□□ 0.08
CAGE1-201ENST00000296742 USP6P35125 1406 aa15.52■□□□□ 0.08
CAGE1-201ENST00000296742 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
CAGE1-201ENST00000296742 ARID3AQ99856 593 aa15.52■□□□□ 0.07
CAGE1-201ENST00000296742 MBIPQ9NS73 344 aa15.52■□□□□ 0.07
CAGE1-201ENST00000296742 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.07
CAGE1-201ENST00000296742 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.07
CAGE1-201ENST00000296742 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 MSNP26038 577 aaKnown RBP15.51■□□□□ 0.07
CAGE1-201ENST00000296742 GBP4Q96PP9 640 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 MON2Q7Z3U7 1717 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 KRT24Q2M2I5 525 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 ATF7IPQ6VMQ6 1270 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 MCM10Q7L590 875 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 TMEM57Q8N5G2 664 aa15.51■□□□□ 0.07
CAGE1-201ENST00000296742 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 NLRP6P59044 892 aa15.5■□□□□ 0.07
CAGE1-201ENST00000296742 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 RGPD8O14715 1765 aaPredicted RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 NASPP49321 788 aaPredicted RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
CAGE1-201ENST00000296742 ANP32BQ92688 251 aaKnown RBP15.5■□□□□ 0.07
CAGE1-201ENST00000296742 ARHGAP23Q9P227 1491 aa15.5■□□□□ 0.07
CAGE1-201ENST00000296742 IL16Q14005 1332 aa15.5■□□□□ 0.07
CAGE1-201ENST00000296742 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms