RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ARHGEF10O15013 1369 aa11.94□□□□□ -0.5
PDPN-201ENST00000294489 IL16Q14005 1332 aa11.94□□□□□ -0.5
PDPN-201ENST00000294489 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
PDPN-201ENST00000294489 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
PDPN-201ENST00000294489 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
PDPN-201ENST00000294489 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
PDPN-201ENST00000294489 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
PDPN-201ENST00000294489 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
PDPN-201ENST00000294489 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
PDPN-201ENST00000294489 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
PDPN-201ENST00000294489 KDRP35968 1356 aa11.92□□□□□ -0.5
PDPN-201ENST00000294489 USP19O94966 1318 aa11.92□□□□□ -0.5
PDPN-201ENST00000294489 NLRP6P59044 892 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
PDPN-201ENST00000294489 MED1Q15648 1581 aaPredicted RBP11.91□□□□□ -0.5
PDPN-201ENST00000294489 PXDNQ92626 1479 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
PDPN-201ENST00000294489 PLIN1O60240 522 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 MAPK8IP3Q9UPT6 1336 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
PDPN-201ENST00000294489 ABCC6O95255 1503 aa11.9□□□□□ -0.5
PDPN-201ENST00000294489 PSME1Q06323 249 aa11.9□□□□□ -0.5
PDPN-201ENST00000294489 NFE2L2Q16236 605 aa11.9□□□□□ -0.5
PDPN-201ENST00000294489 HSP90AB2PQ58FF8 381 aa11.9□□□□□ -0.5
PDPN-201ENST00000294489 MSH6P52701 1360 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 COL18A1P39060 1754 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 ATF3P18847 181 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 HOXC9P31274 260 aa11.89□□□□□ -0.51
PDPN-201ENST00000294489 RIPK4P57078 832 aa11.88□□□□□ -0.51
PDPN-201ENST00000294489 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
PDPN-201ENST00000294489 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
PDPN-201ENST00000294489 NHSL1Q5SYE7 1610 aa11.88□□□□□ -0.51
PDPN-201ENST00000294489 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
PDPN-201ENST00000294489 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
PDPN-201ENST00000294489 HMOX1P09601 288 aa11.87□□□□□ -0.51
PDPN-201ENST00000294489 KRT28Q7Z3Y7 464 aa11.87□□□□□ -0.51
PDPN-201ENST00000294489 CRBNQ96SW2 442 aa11.87□□□□□ -0.51
PDPN-201ENST00000294489 NEFMP07197 916 aa11.86□□□□□ -0.51
PDPN-201ENST00000294489 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
PDPN-201ENST00000294489 FOXO3O43524 673 aa11.86□□□□□ -0.51
PDPN-201ENST00000294489 IP6K1Q92551 441 aa11.86□□□□□ -0.51
PDPN-201ENST00000294489 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
PDPN-201ENST00000294489 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
PDPN-201ENST00000294489 ZNF335Q9H4Z2 1342 aaPredicted RBP11.85□□□□□ -0.51
PDPN-201ENST00000294489 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
PDPN-201ENST00000294489 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
PDPN-201ENST00000294489 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
PDPN-201ENST00000294489 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
PDPN-201ENST00000294489 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
PDPN-201ENST00000294489 AMPHP49418 695 aa11.85□□□□□ -0.51
PDPN-201ENST00000294489 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 EYA1Q99502 592 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
PDPN-201ENST00000294489 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
PDPN-201ENST00000294489 BCAR3O75815 825 aa11.83□□□□□ -0.52
PDPN-201ENST00000294489 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
PDPN-201ENST00000294489 LTBP4Q8N2S1 1624 aa11.83□□□□□ -0.52
PDPN-201ENST00000294489 GCP02774 474 aa11.82□□□□□ -0.52
PDPN-201ENST00000294489 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
PDPN-201ENST00000294489 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
PDPN-201ENST00000294489 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
PDPN-201ENST00000294489 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
PDPN-201ENST00000294489 SPATA31A3Q5VYP0 1347 aa11.81□□□□□ -0.52
PDPN-201ENST00000294489 CRB1P82279 1406 aa11.81□□□□□ -0.52
PDPN-201ENST00000294489 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
PDPN-201ENST00000294489 SOX12O15370 315 aa11.81□□□□□ -0.52
PDPN-201ENST00000294489 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
PDPN-201ENST00000294489 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
PDPN-201ENST00000294489 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
PDPN-201ENST00000294489 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
PDPN-201ENST00000294489 CPDO75976 1380 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
PDPN-201ENST00000294489 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
PDPN-201ENST00000294489 GNAI1P63096 354 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
PDPN-201ENST00000294489 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
PDPN-201ENST00000294489 EXOSC9Q06265 439 aaKnown RBP11.78□□□□□ -0.52
PDPN-201ENST00000294489 MTHFSDQ2M296 383 aaKnown RBP11.77□□□□□ -0.52
PDPN-201ENST00000294489 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.52
PDPN-201ENST00000294489 AHDC1Q5TGY3 1603 aaPredicted RBP11.77□□□□□ -0.53
PDPN-201ENST00000294489 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.53
PDPN-201ENST00000294489 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.53
PDPN-201ENST00000294489 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
PDPN-201ENST00000294489 COL22A1Q8NFW1 1626 aaPredicted RBP11.76□□□□□ -0.53
PDPN-201ENST00000294489 DDX17Q92841 729 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms