RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SLC26A8Q96RN1 970 aa14.66□□□□□ -0.06
SLX4-201ENST00000294008 WWC3Q9ULE0 1092 aa14.66□□□□□ -0.06
SLX4-201ENST00000294008 LMAN1P49257 510 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 TRIM22Q8IYM9 498 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 FERP16591 822 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 CABP4P57796 275 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
SLX4-201ENST00000294008 SPATA24Q86W54 205 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 CETN2P41208 172 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 NOP2P46087 812 aaKnown RBP14.65□□□□□ -0.06
SLX4-201ENST00000294008 CCDC178Q5BJE1 867 aa14.65□□□□□ -0.06
SLX4-201ENST00000294008 LARP1Q6PKG0 1096 aaKnown RBP14.65□□□□□ -0.06
SLX4-201ENST00000294008 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.65□□□□□ -0.06
SLX4-201ENST00000294008 SURF6O75683 361 aaKnown RBP14.64□□□□□ -0.07
SLX4-201ENST00000294008 RBM25P49756 843 aaKnown RBP14.64□□□□□ -0.07
SLX4-201ENST00000294008 CCDC57Q2TAC2 916 aa14.64□□□□□ -0.07
SLX4-201ENST00000294008 ABTB2Q8N961 1025 aa14.64□□□□□ -0.07
SLX4-201ENST00000294008 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
SLX4-201ENST00000294008 HOOK3Q86VS8 718 aa14.64□□□□□ -0.07
SLX4-201ENST00000294008 LRRCC1Q9C099 1032 aa14.64□□□□□ -0.07
SLX4-201ENST00000294008 FIBPO43427 364 aa14.64□□□□□ -0.07
SLX4-201ENST00000294008 RAB3IL1Q8TBN0 382 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 BMS1Q14692 1282 aaKnown RBP14.63□□□□□ -0.07
SLX4-201ENST00000294008 CCDC102AQ96A19 550 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 TIGD1Q96MW7 591 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 ZNF396Q96N95 335 aaPredicted RBP14.63□□□□□ -0.07
SLX4-201ENST00000294008 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 NLRP6P59044 892 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 ME1P48163 572 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
SLX4-201ENST00000294008 ROCK1Q13464 1354 aa14.63□□□□□ -0.07
SLX4-201ENST00000294008 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
SLX4-201ENST00000294008 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
SLX4-201ENST00000294008 SPTY2D1Q68D10 685 aaPredicted RBP14.62□□□□□ -0.07
SLX4-201ENST00000294008 CCDC96Q2M329 555 aa14.62□□□□□ -0.07
SLX4-201ENST00000294008 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
SLX4-201ENST00000294008 LRP2BPQ9P2M1 347 aa14.62□□□□□ -0.07
SLX4-201ENST00000294008 KIF20AO95235 890 aa14.62□□□□□ -0.07
SLX4-201ENST00000294008 NOL7Q9UMY1 257 aaKnown RBP14.62□□□□□ -0.07
SLX4-201ENST00000294008 BIN2Q9UBW5 565 aaPredicted RBP14.61□□□□□ -0.07
SLX4-201ENST00000294008 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 RBM10P98175 930 aaKnown RBP14.61□□□□□ -0.07
SLX4-201ENST00000294008 GSE1Q14687 1217 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 CENPQQ7L2Z9 268 aaPredicted RBP14.61□□□□□ -0.07
SLX4-201ENST00000294008 ABCF2Q9UG63 623 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 MPHOSPH9Q99550 1183 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 EP400NLQ6ZTU2 488 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
SLX4-201ENST00000294008 ANKIB1Q9P2G1 1089 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 USP8P40818 1118 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 PPP1R12BO60237 982 aaPredicted RBP14.6□□□□□ -0.07
SLX4-201ENST00000294008 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
SLX4-201ENST00000294008 BIRC2Q13490 618 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 TSNARE1Q96NA8 513 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 APAF1O14727 1248 aa14.6□□□□□ -0.07
SLX4-201ENST00000294008 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
SLX4-201ENST00000294008 CCP110O43303 1012 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 CAVIN1Q6NZI2 390 aaKnown RBP14.59□□□□□ -0.07
SLX4-201ENST00000294008 TXLNBQ8N3L3 684 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 CCDC39Q9UFE4 941 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
SLX4-201ENST00000294008 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 ERICH4A6NGS2 130 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 CEP57L1Q8IYX8 460 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 ANKRD18BA2A2Z9 1011 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.59□□□□□ -0.07
SLX4-201ENST00000294008 TMX1Q9H3N1 280 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 MMRN2Q9H8L6 949 aa14.59□□□□□ -0.07
SLX4-201ENST00000294008 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.07
SLX4-201ENST00000294008 TERF1P54274 439 aa14.58□□□□□ -0.07
SLX4-201ENST00000294008 DACH1Q9UI36 760 aa14.58□□□□□ -0.07
SLX4-201ENST00000294008 CCDC175P0C221 793 aa14.58□□□□□ -0.08
SLX4-201ENST00000294008 NUCB2P80303 420 aa14.58□□□□□ -0.08
SLX4-201ENST00000294008 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 IFFO1Q0D2I5 559 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 DPH6Q7L8W6 267 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 TAF12Q16514 161 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 FEZ1Q99689 392 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 NDC80O14777 642 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 PSMC4P43686 418 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 C1orf115Q9H7X2 142 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 TATP17735 454 aaPredicted RBP14.57□□□□□ -0.08
SLX4-201ENST00000294008 ATP2B3Q16720 1220 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
SLX4-201ENST00000294008 CFAP57Q96MR6 1250 aa14.57□□□□□ -0.08
SLX4-201ENST00000294008 PDE4AP27815 886 aa14.56□□□□□ -0.08
SLX4-201ENST00000294008 NASPP49321 788 aaPredicted RBP14.56□□□□□ -0.08
SLX4-201ENST00000294008 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
SLX4-201ENST00000294008 VGFO15240 615 aaPredicted RBP14.56□□□□□ -0.08
SLX4-201ENST00000294008 NLRP13Q86W25 1043 aa14.56□□□□□ -0.08
SLX4-201ENST00000294008 TSPY26PQ9H489 355 aa14.56□□□□□ -0.08
SLX4-201ENST00000294008 CCDC66A2RUB6 948 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
SLX4-201ENST00000294008 CUL5Q93034 780 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms