RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 USP26Q9BXU7 913 aa18.99■□□□□ 0.63
ZNF563-201ENST00000293725 DNTTIP2Q5QJE6 756 aaKnown RBP18.98■□□□□ 0.63
ZNF563-201ENST00000293725 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
ZNF563-201ENST00000293725 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
ZNF563-201ENST00000293725 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
ZNF563-201ENST00000293725 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
ZNF563-201ENST00000293725 PLEKHM2Q8IWE5 1019 aa18.98■□□□□ 0.63
ZNF563-201ENST00000293725 CCDC94Q9BW85 323 aaPredicted RBP18.98■□□□□ 0.63
ZNF563-201ENST00000293725 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
ZNF563-201ENST00000293725 A0A0U1RQG5 324 aaPredicted RBP18.97■□□□□ 0.63
ZNF563-201ENST00000293725 ST18O60284 1047 aa18.97■□□□□ 0.63
ZNF563-201ENST00000293725 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
ZNF563-201ENST00000293725 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
ZNF563-201ENST00000293725 KIF1BO60333 1816 aa18.97■□□□□ 0.63
ZNF563-201ENST00000293725 KIAA2012Q0VF49 1180 aa18.97■□□□□ 0.63
ZNF563-201ENST00000293725 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
ZNF563-201ENST00000293725 MROH2AA6NES4 1674 aa18.96■□□□□ 0.63
ZNF563-201ENST00000293725 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
ZNF563-201ENST00000293725 ZFYVE16Q7Z3T8 1539 aa18.96■□□□□ 0.63
ZNF563-201ENST00000293725 ZC3H13Q5T200 1668 aaKnown RBP18.96■□□□□ 0.63
ZNF563-201ENST00000293725 INO80Q9ULG1 1556 aaPredicted RBP18.95■□□□□ 0.62
ZNF563-201ENST00000293725 TTC22Q5TAA0 569 aa18.95■□□□□ 0.62
ZNF563-201ENST00000293725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
ZNF563-201ENST00000293725 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
ZNF563-201ENST00000293725 IFT172Q9UG01 1749 aa18.95■□□□□ 0.62
ZNF563-201ENST00000293725 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
ZNF563-201ENST00000293725 MPNDQ8N594 471 aa18.95■□□□□ 0.62
ZNF563-201ENST00000293725 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
ZNF563-201ENST00000293725 TSC1Q92574 1164 aa18.95■□□□□ 0.62
ZNF563-201ENST00000293725 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
ZNF563-201ENST00000293725 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
ZNF563-201ENST00000293725 C16orf71Q8IYS4 520 aaPredicted RBP18.94■□□□□ 0.62
ZNF563-201ENST00000293725 C14orf93Q9H972 538 aaKnown RBP18.94■□□□□ 0.62
ZNF563-201ENST00000293725 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
ZNF563-201ENST00000293725 MYRIPQ8NFW9 859 aa18.93■□□□□ 0.62
ZNF563-201ENST00000293725 CFAP44Q96MT7 982 aa18.93■□□□□ 0.62
ZNF563-201ENST00000293725 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
ZNF563-201ENST00000293725 TSPYL6Q8N831 410 aa18.93■□□□□ 0.62
ZNF563-201ENST00000293725 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
ZNF563-201ENST00000293725 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 VAMP4O75379 141 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 MBD3O95983 291 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 DMTNQ08495 405 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
ZNF563-201ENST00000293725 TSPY26PQ9H489 355 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 REREQ9P2R6 1566 aa18.92■□□□□ 0.62
ZNF563-201ENST00000293725 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
ZNF563-201ENST00000293725 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
ZNF563-201ENST00000293725 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
ZNF563-201ENST00000293725 ARHGAP45Q92619 1136 aa18.91■□□□□ 0.62
ZNF563-201ENST00000293725 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
ZNF563-201ENST00000293725 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
ZNF563-201ENST00000293725 OTUD7AQ8TE49 926 aaPredicted RBP18.91■□□□□ 0.62
ZNF563-201ENST00000293725 PTCH1Q13635 1447 aa18.9■□□□□ 0.62
ZNF563-201ENST00000293725 ZSCAN20P17040 1043 aaPredicted RBP18.9■□□□□ 0.62
ZNF563-201ENST00000293725 ZNF830Q96NB3 372 aaPredicted RBP18.9■□□□□ 0.62
ZNF563-201ENST00000293725 ABCC4O15439 1325 aa18.9■□□□□ 0.62
ZNF563-201ENST00000293725 CASC1Q6TDU7 716 aa18.89■□□□□ 0.62
ZNF563-201ENST00000293725 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
ZNF563-201ENST00000293725 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
ZNF563-201ENST00000293725 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
ZNF563-201ENST00000293725 APBB1O00213 710 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 SDSP20132 328 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 CBX1P83916 185 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 ZNF710Q8N1W2 664 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 TULP4Q9NRJ4 1543 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 PRKAR2BP31323 418 aa18.88■□□□□ 0.61
ZNF563-201ENST00000293725 DCTPP1Q9H773 170 aa18.87■□□□□ 0.61
ZNF563-201ENST00000293725 FAM177BA6PVY3 158 aa18.87■□□□□ 0.61
ZNF563-201ENST00000293725 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
ZNF563-201ENST00000293725 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
ZNF563-201ENST00000293725 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
ZNF563-201ENST00000293725 PRIMPOLQ96LW4 560 aa18.86■□□□□ 0.61
ZNF563-201ENST00000293725 C17orf53Q8N3J3 647 aaPredicted RBP18.86■□□□□ 0.61
ZNF563-201ENST00000293725 REC8O95072 547 aa18.85■□□□□ 0.61
ZNF563-201ENST00000293725 SRPK2P78362 688 aaKnown RBP18.85■□□□□ 0.61
ZNF563-201ENST00000293725 FYB1O15117 783 aa18.85■□□□□ 0.61
ZNF563-201ENST00000293725 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
ZNF563-201ENST00000293725 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
ZNF563-201ENST00000293725 PIBF1Q8WXW3 757 aa18.85■□□□□ 0.61
ZNF563-201ENST00000293725 SYAP1Q96A49 352 aaPredicted RBP18.85■□□□□ 0.61
ZNF563-201ENST00000293725 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
ZNF563-201ENST00000293725 ATP7AQ04656 1500 aa18.85■□□□□ 0.61
ZNF563-201ENST00000293725 NEK4P51957 841 aa18.84■□□□□ 0.61
ZNF563-201ENST00000293725 HMGN5P82970 282 aaKnown RBP18.84■□□□□ 0.61
ZNF563-201ENST00000293725 TMX3Q96JJ7 454 aa18.84■□□□□ 0.61
ZNF563-201ENST00000293725 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
ZNF563-201ENST00000293725 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
ZNF563-201ENST00000293725 FCHSD2O94868 740 aa18.83■□□□□ 0.61
ZNF563-201ENST00000293725 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.61
ZNF563-201ENST00000293725 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.61
ZNF563-201ENST00000293725 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.61
ZNF563-201ENST00000293725 TTC12Q9H892 705 aaPredicted RBP18.83■□□□□ 0.61
ZNF563-201ENST00000293725 USP25Q9UHP3 1055 aa18.83■□□□□ 0.61
ZNF563-201ENST00000293725 BRD1O95696 1058 aa18.83■□□□□ 0.6
ZNF563-201ENST00000293725 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
ZNF563-201ENST00000293725 GDPD2Q9HCC8 539 aa18.83■□□□□ 0.6
ZNF563-201ENST00000293725 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.6
ZNF563-201ENST00000293725 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
ZNF563-201ENST00000293725 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms