RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
PSME3-201ENST00000293362 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
PSME3-201ENST00000293362 USP6P35125 1406 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 HSPA2P54652 639 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
PSME3-201ENST00000293362 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 AMPHP49418 695 aa13.11□□□□□ -0.31
PSME3-201ENST00000293362 IGHDP01880 384 aa13.1□□□□□ -0.31
PSME3-201ENST00000293362 FOXO3O43524 673 aa13.1□□□□□ -0.31
PSME3-201ENST00000293362 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
PSME3-201ENST00000293362 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
PSME3-201ENST00000293362 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
PSME3-201ENST00000293362 MSH5O43196 834 aa13.09□□□□□ -0.31
PSME3-201ENST00000293362 MCM10Q7L590 875 aa13.09□□□□□ -0.31
PSME3-201ENST00000293362 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
PSME3-201ENST00000293362 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
PSME3-201ENST00000293362 ANP32EQ9BTT0 268 aa13.08□□□□□ -0.31
PSME3-201ENST00000293362 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.32
PSME3-201ENST00000293362 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
PSME3-201ENST00000293362 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
PSME3-201ENST00000293362 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
PSME3-201ENST00000293362 USHBP1Q8N6Y0 703 aa13.08□□□□□ -0.32
PSME3-201ENST00000293362 NOB1Q9ULX3 412 aaKnown RBP13.08□□□□□ -0.32
PSME3-201ENST00000293362 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
PSME3-201ENST00000293362 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
PSME3-201ENST00000293362 PSME1Q06323 249 aa13.07□□□□□ -0.32
PSME3-201ENST00000293362 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
PSME3-201ENST00000293362 ANKRD26Q9UPS8 1709 aa13.06□□□□□ -0.32
PSME3-201ENST00000293362 DIP2AQ14689 1571 aa13.06□□□□□ -0.32
PSME3-201ENST00000293362 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
PSME3-201ENST00000293362 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
PSME3-201ENST00000293362 MBIPQ9NS73 344 aa13.06□□□□□ -0.32
PSME3-201ENST00000293362 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 TRIM27P14373 513 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
PSME3-201ENST00000293362 PDE4AP27815 886 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 EYA1Q99502 592 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
PSME3-201ENST00000293362 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
PSME3-201ENST00000293362 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
PSME3-201ENST00000293362 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
PSME3-201ENST00000293362 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
PSME3-201ENST00000293362 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
PSME3-201ENST00000293362 MON2Q7Z3U7 1717 aa13.03□□□□□ -0.32
PSME3-201ENST00000293362 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.33
PSME3-201ENST00000293362 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
PSME3-201ENST00000293362 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
PSME3-201ENST00000293362 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
PSME3-201ENST00000293362 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
PSME3-201ENST00000293362 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
PSME3-201ENST00000293362 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
PSME3-201ENST00000293362 VAMP4O75379 141 aa13□□□□□ -0.33
PSME3-201ENST00000293362 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
PSME3-201ENST00000293362 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
PSME3-201ENST00000293362 HOXC9P31274 260 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 GNAI1P63096 354 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 MVPQ14764 893 aaKnown RBP12.99□□□□□ -0.33
PSME3-201ENST00000293362 C1orf115Q9H7X2 142 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 IL16Q14005 1332 aa12.99□□□□□ -0.33
PSME3-201ENST00000293362 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
PSME3-201ENST00000293362 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
PSME3-201ENST00000293362 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
PSME3-201ENST00000293362 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
PSME3-201ENST00000293362 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
PSME3-201ENST00000293362 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
PSME3-201ENST00000293362 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
PSME3-201ENST00000293362 XRN1Q8IZH2 1706 aaKnown RBP12.97□□□□□ -0.33
PSME3-201ENST00000293362 FLT4P35916 1363 aa12.97□□□□□ -0.33
PSME3-201ENST00000293362 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
PSME3-201ENST00000293362 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
PSME3-201ENST00000293362 ZC3H6P61129 1189 aaKnown RBP12.96□□□□□ -0.33
PSME3-201ENST00000293362 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
PSME3-201ENST00000293362 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
PSME3-201ENST00000293362 ZNF853P0CG23 659 aa12.96□□□□□ -0.34
PSME3-201ENST00000293362 CABLES1Q8TDN4 633 aa12.95□□□□□ -0.34
PSME3-201ENST00000293362 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
PSME3-201ENST00000293362 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
PSME3-201ENST00000293362 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
PSME3-201ENST00000293362 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
PSME3-201ENST00000293362 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
PSME3-201ENST00000293362 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
PSME3-201ENST00000293362 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
PSME3-201ENST00000293362 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
PSME3-201ENST00000293362 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
PSME3-201ENST00000293362 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
PSME3-201ENST00000293362 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
PSME3-201ENST00000293362 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
PSME3-201ENST00000293362 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
PSME3-201ENST00000293362 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms