RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 AMPHP49418 695 aa12.74□□□□□ -0.37
LRTOMT-201ENST00000289488 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
LRTOMT-201ENST00000289488 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
LRTOMT-201ENST00000289488 BLMP54132 1417 aaPredicted RBP12.74□□□□□ -0.37
LRTOMT-201ENST00000289488 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
LRTOMT-201ENST00000289488 HMOX1P09601 288 aa12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 IL13P35225 146 aa12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 NBR1Q14596 966 aa12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
LRTOMT-201ENST00000289488 USP19O94966 1318 aa12.72□□□□□ -0.37
LRTOMT-201ENST00000289488 LTV1Q96GA3 475 aaPredicted RBP12.72□□□□□ -0.37
LRTOMT-201ENST00000289488 INSRP06213 1382 aa12.72□□□□□ -0.37
LRTOMT-201ENST00000289488 APAF1O14727 1248 aa12.72□□□□□ -0.37
LRTOMT-201ENST00000289488 HOXC9P31274 260 aa12.72□□□□□ -0.37
LRTOMT-201ENST00000289488 FLT4P35916 1363 aa12.71□□□□□ -0.37
LRTOMT-201ENST00000289488 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.37
LRTOMT-201ENST00000289488 SLIT3O75094 1523 aa12.71□□□□□ -0.37
LRTOMT-201ENST00000289488 RGPD5Q99666 1765 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 TOM1O60784 492 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 NEUROD2Q15784 382 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 NUDCQ9Y266 331 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.38
LRTOMT-201ENST00000289488 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
LRTOMT-201ENST00000289488 CRYBG1Q9Y4K1 1723 aa12.7□□□□□ -0.38
LRTOMT-201ENST00000289488 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
LRTOMT-201ENST00000289488 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
LRTOMT-201ENST00000289488 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
LRTOMT-201ENST00000289488 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
LRTOMT-201ENST00000289488 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
LRTOMT-201ENST00000289488 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 RGPD2P0DJD1 1756 aa12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
LRTOMT-201ENST00000289488 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 SULT6B1Q6IMI4 303 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 IP6K1Q92551 441 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 EYA1Q99502 592 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 PHLPP1O60346 1717 aa12.67□□□□□ -0.38
LRTOMT-201ENST00000289488 LRRC59Q96AG4 307 aaKnown RBP12.66□□□□□ -0.38
LRTOMT-201ENST00000289488 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
LRTOMT-201ENST00000289488 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
LRTOMT-201ENST00000289488 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
LRTOMT-201ENST00000289488 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
LRTOMT-201ENST00000289488 ABCA3Q99758 1704 aa12.65□□□□□ -0.38
LRTOMT-201ENST00000289488 FCHSD2O94868 740 aa12.65□□□□□ -0.39
LRTOMT-201ENST00000289488 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
LRTOMT-201ENST00000289488 NBPF6Q5VWK0 638 aa12.64□□□□□ -0.39
LRTOMT-201ENST00000289488 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
LRTOMT-201ENST00000289488 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
LRTOMT-201ENST00000289488 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
LRTOMT-201ENST00000289488 COL18A1P39060 1754 aa12.63□□□□□ -0.39
LRTOMT-201ENST00000289488 KIF24Q5T7B8 1368 aa12.63□□□□□ -0.39
LRTOMT-201ENST00000289488 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
LRTOMT-201ENST00000289488 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
LRTOMT-201ENST00000289488 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
LRTOMT-201ENST00000289488 PRDM11Q9NQV5 511 aa12.62□□□□□ -0.39
LRTOMT-201ENST00000289488 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
LRTOMT-201ENST00000289488 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
LRTOMT-201ENST00000289488 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 ERBB3P21860 1342 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
LRTOMT-201ENST00000289488 RIPK4P57078 832 aa12.6□□□□□ -0.39
LRTOMT-201ENST00000289488 CPDO75976 1380 aa12.6□□□□□ -0.39
LRTOMT-201ENST00000289488 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 NUTM2BA6NNL0 878 aaPredicted RBP12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 NUTM2EB1AL46 878 aaPredicted RBP12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 KDRP35968 1356 aa12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
LRTOMT-201ENST00000289488 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
LRTOMT-201ENST00000289488 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
LRTOMT-201ENST00000289488 LMO7Q8WWI1 1683 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 NEFMP07197 916 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 HSPA1LP34931 641 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms