RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 GNAT3A8MTJ3 354 aa10.03□□□□□ -0.8
KIT-201ENST00000288135 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
KIT-201ENST00000288135 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.8
KIT-201ENST00000288135 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.8
KIT-201ENST00000288135 MAP3K4Q9Y6R4 1608 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
KIT-201ENST00000288135 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 KCNH5Q8NCM2 988 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 ANKRD24Q8TF21 1146 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
KIT-201ENST00000288135 ARHGAP31Q2M1Z3 1444 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 PTCD1O75127 700 aaKnown RBP10.02□□□□□ -0.81
KIT-201ENST00000288135 TRIM27P14373 513 aa10.02□□□□□ -0.81
KIT-201ENST00000288135 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
KIT-201ENST00000288135 GCP02774 474 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 RLBP1P12271 317 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 BTBD11A6QL63 1104 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 PDE3AQ14432 1141 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 CADPS2Q86UW7 1296 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
KIT-201ENST00000288135 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
KIT-201ENST00000288135 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
KIT-201ENST00000288135 IL13P35225 146 aa10□□□□□ -0.81
KIT-201ENST00000288135 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
KIT-201ENST00000288135 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
KIT-201ENST00000288135 FAM177BA6PVY3 158 aa10□□□□□ -0.81
KIT-201ENST00000288135 CLTCQ00610 1675 aaKnown RBP10□□□□□ -0.81
KIT-201ENST00000288135 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
KIT-201ENST00000288135 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
KIT-201ENST00000288135 BECN1Q14457 450 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
KIT-201ENST00000288135 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
KIT-201ENST00000288135 HMMRO75330 724 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 IGHDP01880 384 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 HOXC9P31274 260 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 CASC1Q6TDU7 716 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 ADGRB3O60242 1522 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 CCDC30Q5VVM6 783 aa9.99□□□□□ -0.81
KIT-201ENST00000288135 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 CABP4P57796 275 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 PLEKHG1Q9ULL1 1385 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 TTC21AQ8NDW8 1320 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 KCNJ4P48050 445 aa9.98□□□□□ -0.81
KIT-201ENST00000288135 MSH6P52701 1360 aa9.97□□□□□ -0.81
KIT-201ENST00000288135 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
KIT-201ENST00000288135 MEX3CQ5U5Q3 659 aaKnown RBP9.97□□□□□ -0.81
KIT-201ENST00000288135 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
KIT-201ENST00000288135 NPC1L1Q9UHC9 1359 aa9.97□□□□□ -0.81
KIT-201ENST00000288135 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.81
KIT-201ENST00000288135 ALKQ9UM73 1620 aa9.96□□□□□ -0.81
KIT-201ENST00000288135 JARID2Q92833 1246 aaPredicted RBP9.96□□□□□ -0.81
KIT-201ENST00000288135 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.81
KIT-201ENST00000288135 UBTFL1P0CB47 393 aaPredicted RBP9.96□□□□□ -0.82
KIT-201ENST00000288135 NBPF6Q5VWK0 638 aa9.96□□□□□ -0.82
KIT-201ENST00000288135 NBPF4Q96M43 638 aa9.96□□□□□ -0.82
KIT-201ENST00000288135 GLI2P10070 1586 aa9.96□□□□□ -0.82
KIT-201ENST00000288135 HSP90AB1P08238 724 aaKnown RBP9.96□□□□□ -0.82
KIT-201ENST00000288135 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 NEXNQ0ZGT2 675 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 IPO9Q96P70 1041 aaKnown RBP9.95□□□□□ -0.82
KIT-201ENST00000288135 SPG7Q9UQ90 795 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
KIT-201ENST00000288135 NLRP1Q9C000 1473 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 FLT4P35916 1363 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 TMEM94Q12767 1356 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
KIT-201ENST00000288135 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
KIT-201ENST00000288135 SYNMO15061 1565 aa9.94□□□□□ -0.82
KIT-201ENST00000288135 SIL1Q9H173 461 aa9.94□□□□□ -0.82
KIT-201ENST00000288135 EXOC6BQ9Y2D4 811 aa9.94□□□□□ -0.82
KIT-201ENST00000288135 NPHP3Q7Z494 1330 aa9.94□□□□□ -0.82
KIT-201ENST00000288135 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
KIT-201ENST00000288135 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
KIT-201ENST00000288135 NAP1L2Q9ULW6 460 aaPredicted RBP9.94□□□□□ -0.82
KIT-201ENST00000288135 SURF6O75683 361 aaKnown RBP9.94□□□□□ -0.82
KIT-201ENST00000288135 IL1RAPL2Q9NP60 686 aa9.93□□□□□ -0.82
KIT-201ENST00000288135 VAMP4O75379 141 aa9.93□□□□□ -0.82
KIT-201ENST00000288135 MROH1Q8NDA8 1641 aa9.93□□□□□ -0.82
KIT-201ENST00000288135 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
KIT-201ENST00000288135 NEXMIFQ5QGS0 1516 aa9.93□□□□□ -0.82
KIT-201ENST00000288135 GTF2E1P29083 439 aaPredicted RBP9.92□□□□□ -0.82
KIT-201ENST00000288135 MAP4K4O95819 1239 aaPredicted RBP9.92□□□□□ -0.82
KIT-201ENST00000288135 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
KIT-201ENST00000288135 DDX58O95786 925 aaKnown RBP9.92□□□□□ -0.82
KIT-201ENST00000288135 IP6K1Q92551 441 aa9.92□□□□□ -0.82
KIT-201ENST00000288135 NPHP4O75161 1426 aaPredicted RBP9.92□□□□□ -0.82
KIT-201ENST00000288135 ZFYVE9O95405 1425 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms