RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
ZIC3-201ENST00000287538 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
ZIC3-201ENST00000287538 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
ZIC3-201ENST00000287538 DZIP1LQ8IYY4 767 aaKnown RBP16.29■□□□□ 0.2
ZIC3-201ENST00000287538 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
ZIC3-201ENST00000287538 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
ZIC3-201ENST00000287538 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
ZIC3-201ENST00000287538 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
ZIC3-201ENST00000287538 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
ZIC3-201ENST00000287538 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 MAP3K19Q56UN5 1328 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 CPS1P31327 1500 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
ZIC3-201ENST00000287538 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
ZIC3-201ENST00000287538 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
ZIC3-201ENST00000287538 INSRP06213 1382 aa16.27■□□□□ 0.2
ZIC3-201ENST00000287538 PCDHB15Q9Y5E8 787 aa16.26■□□□□ 0.19
ZIC3-201ENST00000287538 NLRP1Q9C000 1473 aa16.26■□□□□ 0.19
ZIC3-201ENST00000287538 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
ZIC3-201ENST00000287538 PLEKHG3A1L390 1219 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 TRIM27P14373 513 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 APBB1O00213 710 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
ZIC3-201ENST00000287538 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 SIRT1Q96EB6 747 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
ZIC3-201ENST00000287538 ARXQ96QS3 562 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
ZIC3-201ENST00000287538 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
ZIC3-201ENST00000287538 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
ZIC3-201ENST00000287538 ZC3H6P61129 1189 aaKnown RBP16.23■□□□□ 0.19
ZIC3-201ENST00000287538 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
ZIC3-201ENST00000287538 GNAI1P63096 354 aa16.23■□□□□ 0.19
ZIC3-201ENST00000287538 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
ZIC3-201ENST00000287538 ATP7BP35670 1465 aa16.22■□□□□ 0.19
ZIC3-201ENST00000287538 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
ZIC3-201ENST00000287538 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.19
ZIC3-201ENST00000287538 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
ZIC3-201ENST00000287538 EYA1Q99502 592 aa16.21■□□□□ 0.19
ZIC3-201ENST00000287538 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
ZIC3-201ENST00000287538 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
ZIC3-201ENST00000287538 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
ZIC3-201ENST00000287538 NRXN3Q9Y4C0 1643 aa16.2■□□□□ 0.18
ZIC3-201ENST00000287538 UBR1Q8IWV7 1749 aa16.2■□□□□ 0.18
ZIC3-201ENST00000287538 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
ZIC3-201ENST00000287538 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
ZIC3-201ENST00000287538 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
ZIC3-201ENST00000287538 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
ZIC3-201ENST00000287538 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
ZIC3-201ENST00000287538 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
ZIC3-201ENST00000287538 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
ZIC3-201ENST00000287538 USP6P35125 1406 aa16.19■□□□□ 0.18
ZIC3-201ENST00000287538 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
ZIC3-201ENST00000287538 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
ZIC3-201ENST00000287538 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
ZIC3-201ENST00000287538 DLC1Q96QB1 1528 aa16.18■□□□□ 0.18
ZIC3-201ENST00000287538 HSP90AA2PQ14568 343 aaPredicted RBP16.18■□□□□ 0.18
ZIC3-201ENST00000287538 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
ZIC3-201ENST00000287538 C3P01024 1663 aa16.18■□□□□ 0.18
ZIC3-201ENST00000287538 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
ZIC3-201ENST00000287538 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
ZIC3-201ENST00000287538 ATF3P18847 181 aa16.17■□□□□ 0.18
ZIC3-201ENST00000287538 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
ZIC3-201ENST00000287538 SHPRHQ149N8 1683 aa16.17■□□□□ 0.18
ZIC3-201ENST00000287538 VAMP4O75379 141 aa16.16■□□□□ 0.18
ZIC3-201ENST00000287538 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
ZIC3-201ENST00000287538 RIMS1Q86UR5 1692 aaKnown RBP16.15■□□□□ 0.18
ZIC3-201ENST00000287538 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
ZIC3-201ENST00000287538 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
ZIC3-201ENST00000287538 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
ZIC3-201ENST00000287538 CSB-PGBD3P0DP91 1061 aa16.14■□□□□ 0.17
ZIC3-201ENST00000287538 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
ZIC3-201ENST00000287538 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
ZIC3-201ENST00000287538 HOXC9P31274 260 aa16.14■□□□□ 0.17
ZIC3-201ENST00000287538 DDX19BQ9UMR2 479 aa16.14■□□□□ 0.17
ZIC3-201ENST00000287538 TECPR2O15040 1411 aa16.14■□□□□ 0.17
ZIC3-201ENST00000287538 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
ZIC3-201ENST00000287538 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
ZIC3-201ENST00000287538 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
ZIC3-201ENST00000287538 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
ZIC3-201ENST00000287538 COL3A1P02461 1466 aaPredicted RBP16.13■□□□□ 0.17
ZIC3-201ENST00000287538 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
ZIC3-201ENST00000287538 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
ZIC3-201ENST00000287538 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
ZIC3-201ENST00000287538 F6X3S4 739 aa16.12■□□□□ 0.17
ZIC3-201ENST00000287538 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
ZIC3-201ENST00000287538 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
ZIC3-201ENST00000287538 NLRP2Q9NX02 1062 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 IL16Q14005 1332 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 FLT4P35916 1363 aa16.1■□□□□ 0.17
ZIC3-201ENST00000287538 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms