RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
GGPS1-201ENST00000282841 TTC21AQ8NDW8 1320 aa14.36□□□□□ -0.11
GGPS1-201ENST00000282841 USHBP1Q8N6Y0 703 aa14.35□□□□□ -0.11
GGPS1-201ENST00000282841 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
GGPS1-201ENST00000282841 E9PSI1 815 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 CABLES1Q8TDN4 633 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 FCHSD2O94868 740 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
GGPS1-201ENST00000282841 LRRC7Q96NW7 1537 aa14.33□□□□□ -0.11
GGPS1-201ENST00000282841 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
GGPS1-201ENST00000282841 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
GGPS1-201ENST00000282841 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
GGPS1-201ENST00000282841 UBE2Q2Q8WVN8 375 aa14.32□□□□□ -0.12
GGPS1-201ENST00000282841 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-201ENST00000282841 ZC3H6P61129 1189 aaKnown RBP14.31□□□□□ -0.12
GGPS1-201ENST00000282841 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-201ENST00000282841 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
GGPS1-201ENST00000282841 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
GGPS1-201ENST00000282841 STRCQ7RTU9 1775 aa14.31□□□□□ -0.12
GGPS1-201ENST00000282841 NEFMP07197 916 aa14.31□□□□□ -0.12
GGPS1-201ENST00000282841 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
GGPS1-201ENST00000282841 EYA1Q99502 592 aa14.3□□□□□ -0.12
GGPS1-201ENST00000282841 PPP4R2Q9NY27 417 aa14.3□□□□□ -0.12
GGPS1-201ENST00000282841 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
GGPS1-201ENST00000282841 HOXC9P31274 260 aa14.3□□□□□ -0.12
GGPS1-201ENST00000282841 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
GGPS1-201ENST00000282841 TNNQ9UQP3 1299 aa14.29□□□□□ -0.12
GGPS1-201ENST00000282841 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
GGPS1-201ENST00000282841 TCERG1O14776 1098 aaKnown RBP14.28□□□□□ -0.12
GGPS1-201ENST00000282841 EXOSC9Q06265 439 aaKnown RBP14.28□□□□□ -0.12
GGPS1-201ENST00000282841 MCM10Q7L590 875 aa14.28□□□□□ -0.12
GGPS1-201ENST00000282841 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
GGPS1-201ENST00000282841 GCP02774 474 aa14.28□□□□□ -0.12
GGPS1-201ENST00000282841 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
GGPS1-201ENST00000282841 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
GGPS1-201ENST00000282841 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
GGPS1-201ENST00000282841 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
GGPS1-201ENST00000282841 FLT4P35916 1363 aa14.27□□□□□ -0.13
GGPS1-201ENST00000282841 MST1RQ04912 1400 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 MSH6P52701 1360 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 CLUAP1Q96AJ1 413 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 AXIN2Q9Y2T1 843 aa14.26□□□□□ -0.13
GGPS1-201ENST00000282841 SKAP1Q86WV1 359 aa14.25□□□□□ -0.13
GGPS1-201ENST00000282841 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
GGPS1-201ENST00000282841 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
GGPS1-201ENST00000282841 CHRNA2Q15822 529 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 PANK1Q8TE04 598 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
GGPS1-201ENST00000282841 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
GGPS1-201ENST00000282841 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
GGPS1-201ENST00000282841 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
GGPS1-201ENST00000282841 KRT24Q2M2I5 525 aa14.23□□□□□ -0.13
GGPS1-201ENST00000282841 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
GGPS1-201ENST00000282841 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
GGPS1-201ENST00000282841 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
GGPS1-201ENST00000282841 PODXL2Q9NZ53 605 aa14.22□□□□□ -0.13
GGPS1-201ENST00000282841 IP6K1Q92551 441 aa14.2□□□□□ -0.14
GGPS1-201ENST00000282841 MBIPQ9NS73 344 aa14.2□□□□□ -0.14
GGPS1-201ENST00000282841 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
GGPS1-201ENST00000282841 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
GGPS1-201ENST00000282841 RLBP1P12271 317 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 ARHGEF25Q86VW2 580 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 KCNH5Q8NCM2 988 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 IGSF1Q8N6C5 1336 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
GGPS1-201ENST00000282841 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
GGPS1-201ENST00000282841 LTN1O94822 1766 aa14.18□□□□□ -0.14
GGPS1-201ENST00000282841 DLG5Q8TDM6 1919 aa14.18□□□□□ -0.14
GGPS1-201ENST00000282841 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
GGPS1-201ENST00000282841 ANKRD24Q8TF21 1146 aa14.17□□□□□ -0.14
GGPS1-201ENST00000282841 NFAT5O94916 1531 aa14.17□□□□□ -0.14
GGPS1-201ENST00000282841 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
GGPS1-201ENST00000282841 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.16□□□□□ -0.14
GGPS1-201ENST00000282841 ARHGEF10O15013 1369 aa14.15□□□□□ -0.14
GGPS1-201ENST00000282841 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
GGPS1-201ENST00000282841 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
GGPS1-201ENST00000282841 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
GGPS1-201ENST00000282841 RTF1Q92541 710 aaKnown RBP14.14□□□□□ -0.15
GGPS1-201ENST00000282841 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
GGPS1-201ENST00000282841 NOB1Q9ULX3 412 aaKnown RBP14.14□□□□□ -0.15
GGPS1-201ENST00000282841 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
GGPS1-201ENST00000282841 SPATA31A3Q5VYP0 1347 aa14.14□□□□□ -0.15
GGPS1-201ENST00000282841 TRPM3Q9HCF6 1732 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-201ENST00000282841 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
GGPS1-201ENST00000282841 USP19O94966 1318 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 GNAI1P63096 354 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 NECTIN2Q92692 538 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 KDRP35968 1356 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms