RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 E9PCH4 1651 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 ADAMTS13Q76LX8 1427 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 JCADQ9P266 1359 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 STARD3NLO95772 234 aa9.83□□□□□ -0.84
EPHA4-201ENST00000281821 A0A087WZG4 1122 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 IL2RBP14784 551 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 XPCQ01831 940 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-201ENST00000281821 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 FER1L4A9Z1Z3 1794 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 PARD3Q8TEW0 1356 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 PREX1Q8TCU6 1659 aa9.82□□□□□ -0.84
EPHA4-201ENST00000281821 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 HSP90AB4PQ58FF6 505 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 FRAT1Q92837 279 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-201ENST00000281821 RWDD1Q9H446 243 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-201ENST00000281821 TULP4Q9NRJ4 1543 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 OS9Q13438 667 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-201ENST00000281821 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 TRPC5Q9UL62 973 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-201ENST00000281821 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-201ENST00000281821 MED14O60244 1454 aa9.81□□□□□ -0.84
EPHA4-201ENST00000281821 DDB1Q16531 1140 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 HSP90AB3PQ58FF7 597 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 CEP152O94986 1710 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 USP6P35125 1406 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 LRRFIP1Q32MZ4 808 aaKnown RBP9.8□□□□□ -0.84
EPHA4-201ENST00000281821 USP31Q70CQ4 1352 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 HMOX1P09601 288 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
EPHA4-201ENST00000281821 IFT57Q9NWB7 429 aa9.8□□□□□ -0.84
EPHA4-201ENST00000281821 ZNF652Q9Y2D9 606 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 THRAP3Q9Y2W1 955 aaKnown RBP9.79□□□□□ -0.84
EPHA4-201ENST00000281821 PCDH11XQ9BZA7 1347 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 PCDH11YQ9BZA8 1340 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 RRS1Q15050 365 aaKnown RBP9.79□□□□□ -0.84
EPHA4-201ENST00000281821 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 GPATCH3Q96I76 525 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 TAF7Q15545 349 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-201ENST00000281821 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 SPATA31A3Q5VYP0 1347 aa9.79□□□□□ -0.84
EPHA4-201ENST00000281821 AKAP4Q5JQC9 854 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 DCAF5Q96JK2 942 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 KIF13AQ9H1H9 1805 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 KIF6Q6ZMV9 814 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 CCDC146Q8IYE0 955 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 DDX19BQ9UMR2 479 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 GNAI3P08754 354 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 BRINP3Q76B58 766 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
EPHA4-201ENST00000281821 POLKQ9UBT6 870 aa9.77□□□□□ -0.84
EPHA4-201ENST00000281821 MAP3K19Q56UN5 1328 aa9.77□□□□□ -0.84
EPHA4-201ENST00000281821 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.84
EPHA4-201ENST00000281821 PPP4R2Q9NY27 417 aa9.77□□□□□ -0.85
EPHA4-201ENST00000281821 C1orf167Q5SNV9 1468 aa9.77□□□□□ -0.85
EPHA4-201ENST00000281821 MROH1Q8NDA8 1641 aa9.77□□□□□ -0.85
EPHA4-201ENST00000281821 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.85
EPHA4-201ENST00000281821 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
EPHA4-201ENST00000281821 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-201ENST00000281821 HOXC9P31274 260 aa9.76□□□□□ -0.85
EPHA4-201ENST00000281821 TMPOP42166 694 aaKnown RBP9.76□□□□□ -0.85
EPHA4-201ENST00000281821 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-201ENST00000281821 TNS3Q68CZ2 1445 aa9.76□□□□□ -0.85
EPHA4-201ENST00000281821 HOXB7P09629 217 aa9.76□□□□□ -0.85
EPHA4-201ENST00000281821 RBM33Q96EV2 1170 aaKnown RBP9.76□□□□□ -0.85
EPHA4-201ENST00000281821 C8orf37Q96NL8 207 aa9.76□□□□□ -0.85
EPHA4-201ENST00000281821 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-201ENST00000281821 KDM5AP29375 1690 aaKnown RBP9.76□□□□□ -0.85
EPHA4-201ENST00000281821 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
EPHA4-201ENST00000281821 CARD10Q9BWT7 1032 aa9.75□□□□□ -0.85
EPHA4-201ENST00000281821 FKBP8Q14318 412 aa9.75□□□□□ -0.85
EPHA4-201ENST00000281821 HDGFL1Q5TGJ6 251 aa9.75□□□□□ -0.85
EPHA4-201ENST00000281821 PLEKHG2Q9H7P9 1386 aa9.75□□□□□ -0.85
EPHA4-201ENST00000281821 ARHGEF25Q86VW2 580 aa9.74□□□□□ -0.85
EPHA4-201ENST00000281821 CCT4P50991 539 aaKnown RBP9.74□□□□□ -0.85
EPHA4-201ENST00000281821 FKBP5Q13451 457 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-201ENST00000281821 ALDH1L2Q3SY69 923 aa9.74□□□□□ -0.85
EPHA4-201ENST00000281821 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-201ENST00000281821 BTBD11A6QL63 1104 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 TWISTNBQ3B726 338 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-201ENST00000281821 USP21Q9UK80 565 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
EPHA4-201ENST00000281821 FLAD1Q8NFF5 587 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
EPHA4-201ENST00000281821 BTG4Q9NY30 223 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 TMEM131LA2VDJ0 1609 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 TRPM1Q7Z4N2 1603 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 PDE3AQ14432 1141 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 ITPRIPQ8IWB1 547 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 MSH5O43196 834 aa9.73□□□□□ -0.85
EPHA4-201ENST00000281821 EIF4A2Q14240 407 aaKnown RBP9.73□□□□□ -0.85
EPHA4-201ENST00000281821 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 HYPKQ9NX55 129 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms