RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
TRIM6-201ENST00000278302 NOB1Q9ULX3 412 aaKnown RBP9.47□□□□□ -0.89
TRIM6-201ENST00000278302 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
TRIM6-201ENST00000278302 IL16Q14005 1332 aa9.47□□□□□ -0.89
TRIM6-201ENST00000278302 FCHSD2O94868 740 aa9.47□□□□□ -0.89
TRIM6-201ENST00000278302 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
TRIM6-201ENST00000278302 C22orf23Q9BZE7 217 aa9.47□□□□□ -0.89
TRIM6-201ENST00000278302 ADGRB2O60241 1585 aa9.47□□□□□ -0.89
TRIM6-201ENST00000278302 TRIM27P14373 513 aa9.46□□□□□ -0.89
TRIM6-201ENST00000278302 PRKAR2BP31323 418 aa9.46□□□□□ -0.89
TRIM6-201ENST00000278302 ATF7IPQ6VMQ6 1270 aa9.46□□□□□ -0.89
TRIM6-201ENST00000278302 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.89
TRIM6-201ENST00000278302 CHMP4BQ9H444 224 aaKnown RBP9.46□□□□□ -0.89
TRIM6-201ENST00000278302 ISY1Q9ULR0 285 aaKnown RBP9.46□□□□□ -0.89
TRIM6-201ENST00000278302 DDX19BQ9UMR2 479 aa9.46□□□□□ -0.89
TRIM6-201ENST00000278302 IPO8O15397 1037 aaKnown RBP9.46□□□□□ -0.89
TRIM6-201ENST00000278302 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.89
TRIM6-201ENST00000278302 TSPOAP1O95153 1857 aa9.46□□□□□ -0.89
TRIM6-201ENST00000278302 MED14O60244 1454 aa9.46□□□□□ -0.9
TRIM6-201ENST00000278302 RIMS2Q9UQ26 1411 aa9.46□□□□□ -0.9
TRIM6-201ENST00000278302 HMOX1P09601 288 aa9.46□□□□□ -0.9
TRIM6-201ENST00000278302 ANP32BQ92688 251 aaKnown RBP9.46□□□□□ -0.9
TRIM6-201ENST00000278302 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
TRIM6-201ENST00000278302 COL3A1P02461 1466 aaPredicted RBP9.46□□□□□ -0.9
TRIM6-201ENST00000278302 ARHGEF40Q8TER5 1519 aa9.45□□□□□ -0.9
TRIM6-201ENST00000278302 HSCBQ8IWL3 235 aa9.45□□□□□ -0.9
TRIM6-201ENST00000278302 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
TRIM6-201ENST00000278302 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
TRIM6-201ENST00000278302 ZSCAN20P17040 1043 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-201ENST00000278302 DMTNQ08495 405 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 CLTCQ00610 1675 aaKnown RBP9.44□□□□□ -0.9
TRIM6-201ENST00000278302 TMEM57Q8N5G2 664 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM6-201ENST00000278302 PNPLA6Q8IY17 1366 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 ANKRD26Q9UPS8 1709 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-201ENST00000278302 TSC1Q92574 1164 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
TRIM6-201ENST00000278302 KIF16BQ96L93 1317 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 HDGFP51858 240 aaKnown RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 NME9Q86XW9 330 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 CBX1P83916 185 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 NAP1L2Q9ULW6 460 aaPredicted RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 TERF1P54274 439 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
TRIM6-201ENST00000278302 AEBP2Q6ZN18 517 aaPredicted RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.43□□□□□ -0.9
TRIM6-201ENST00000278302 KIF20BQ96Q89 1820 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 VGLL3A8MV65 326 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 COG3Q96JB2 828 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 PHACTR3Q96KR7 559 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 GBP4Q96PP9 640 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 HDAC1Q13547 482 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-201ENST00000278302 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 THUMPD2Q9BTF0 503 aaKnown RBP9.42□□□□□ -0.9
TRIM6-201ENST00000278302 PPIP5K1Q6PFW1 1433 aa9.42□□□□□ -0.9
TRIM6-201ENST00000278302 ATP7BP35670 1465 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
TRIM6-201ENST00000278302 NCLP19338 710 aaKnown RBP9.41□□□□□ -0.9
TRIM6-201ENST00000278302 DDX49Q9Y6V7 483 aaKnown RBP9.41□□□□□ -0.9
TRIM6-201ENST00000278302 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 AGLP35573 1532 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 DIP2BQ9P265 1576 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 DYNC1I1O14576 645 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 IGSF3O75054 1194 aa9.41□□□□□ -0.9
TRIM6-201ENST00000278302 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
TRIM6-201ENST00000278302 CCDC94Q9BW85 323 aaPredicted RBP9.41□□□□□ -0.9
TRIM6-201ENST00000278302 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 GNAI1P63096 354 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 RRS1Q15050 365 aaKnown RBP9.4□□□□□ -0.9
TRIM6-201ENST00000278302 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 METP08581 1390 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
TRIM6-201ENST00000278302 IL13P35225 146 aa9.4□□□□□ -0.91
TRIM6-201ENST00000278302 UTP14CQ5TAP6 766 aaKnown RBP9.4□□□□□ -0.91
TRIM6-201ENST00000278302 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.91
TRIM6-201ENST00000278302 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
TRIM6-201ENST00000278302 FAM135BQ49AJ0 1406 aa9.4□□□□□ -0.91
TRIM6-201ENST00000278302 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.91
TRIM6-201ENST00000278302 DDIT3P35638 169 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
TRIM6-201ENST00000278302 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 SPATA31D1Q6ZQQ2 1576 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 SSFA2P28290 1259 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
TRIM6-201ENST00000278302 AK9Q5TCS8 1911 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 ZBTB22O15209 634 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 ZNF500O60304 480 aaPredicted RBP9.39□□□□□ -0.91
TRIM6-201ENST00000278302 VAMP4O75379 141 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms