RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NEFMP07197 916 aa28.83■■■□□ 2.2
CCDC7-201ENST00000277657 NUTM2GQ5VZR2 741 aa28.83■■■□□ 2.2
CCDC7-201ENST00000277657 ATF3P18847 181 aa28.82■■■□□ 2.2
CCDC7-201ENST00000277657 RIPK4P57078 832 aa28.82■■■□□ 2.2
CCDC7-201ENST00000277657 FOXO3O43524 673 aa28.81■■■□□ 2.2
CCDC7-201ENST00000277657 PHACTR3Q96KR7 559 aa28.81■■■□□ 2.2
CCDC7-201ENST00000277657 TRPM3Q9HCF6 1732 aaPredicted RBP28.8■■■□□ 2.2
CCDC7-201ENST00000277657 XIRP1Q702N8 1843 aaKnown RBP28.8■■■□□ 2.2
CCDC7-201ENST00000277657 IL16Q14005 1332 aa28.79■■■□□ 2.2
CCDC7-201ENST00000277657 NFE2L2Q16236 605 aa28.78■■■□□ 2.2
CCDC7-201ENST00000277657 AMPHP49418 695 aa28.78■■■□□ 2.2
CCDC7-201ENST00000277657 MYH16Q9H6N6 1097 aa28.78■■■□□ 2.2
CCDC7-201ENST00000277657 NFAT5O94916 1531 aa28.77■■■□□ 2.2
CCDC7-201ENST00000277657 CADPS2Q86UW7 1296 aa28.77■■■□□ 2.2
CCDC7-201ENST00000277657 ARHGEF10O15013 1369 aa28.76■■■□□ 2.19
CCDC7-201ENST00000277657 MSH6P52701 1360 aa28.75■■■□□ 2.19
CCDC7-201ENST00000277657 RTL1A6NKG5 1358 aa28.74■■■□□ 2.19
CCDC7-201ENST00000277657 SULT6B1Q6IMI4 303 aa28.74■■■□□ 2.19
CCDC7-201ENST00000277657 PLIN1O60240 522 aa28.73■■■□□ 2.19
CCDC7-201ENST00000277657 HOXC9P31274 260 aa28.73■■■□□ 2.19
CCDC7-201ENST00000277657 KRT28Q7Z3Y7 464 aa28.73■■■□□ 2.19
CCDC7-201ENST00000277657 AEBP1Q8IUX7 1158 aa28.73■■■□□ 2.19
CCDC7-201ENST00000277657 PELP1Q8IZL8 1130 aaKnown RBP28.73■■■□□ 2.19
CCDC7-201ENST00000277657 LTN1O94822 1766 aa28.73■■■□□ 2.19
CCDC7-201ENST00000277657 XPCQ01831 940 aaPredicted RBP28.72■■■□□ 2.19
CCDC7-201ENST00000277657 SLIT3O75094 1523 aa28.72■■■□□ 2.19
CCDC7-201ENST00000277657 PHRF1Q9P1Y6 1649 aaKnown RBP28.71■■■□□ 2.19
CCDC7-201ENST00000277657 KCNH5Q8NCM2 988 aa28.71■■■□□ 2.19
CCDC7-201ENST00000277657 DLG5Q8TDM6 1919 aa28.7■■■□□ 2.19
CCDC7-201ENST00000277657 KDRP35968 1356 aa28.7■■■□□ 2.18
CCDC7-201ENST00000277657 IGSF1Q8N6C5 1336 aa28.69■■■□□ 2.18
CCDC7-201ENST00000277657 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
CCDC7-201ENST00000277657 FANCIQ9NVI1 1328 aa28.69■■■□□ 2.18
CCDC7-201ENST00000277657 ALS2Q96Q42 1657 aa28.69■■■□□ 2.18
CCDC7-201ENST00000277657 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.68■■■□□ 2.18
CCDC7-201ENST00000277657 USP19O94966 1318 aa28.67■■■□□ 2.18
CCDC7-201ENST00000277657 EXOC6Q8TAG9 804 aa28.67■■■□□ 2.18
CCDC7-201ENST00000277657 B4GALNT3Q6L9W6 998 aa28.66■■■□□ 2.18
CCDC7-201ENST00000277657 LMOD3Q0VAK6 560 aa28.66■■■□□ 2.18
CCDC7-201ENST00000277657 EYA1Q99502 592 aa28.66■■■□□ 2.18
CCDC7-201ENST00000277657 BCAR3O75815 825 aa28.65■■■□□ 2.18
CCDC7-201ENST00000277657 CT47B1P0C2W7 299 aaPredicted RBP28.65■■■□□ 2.18
CCDC7-201ENST00000277657 IP6K1Q92551 441 aa28.65■■■□□ 2.18
CCDC7-201ENST00000277657 CALD1Q05682 793 aaKnown RBP28.63■■■□□ 2.17
CCDC7-201ENST00000277657 TSR2Q969E8 191 aaKnown RBP28.63■■■□□ 2.17
CCDC7-201ENST00000277657 GCP02774 474 aa28.63■■■□□ 2.17
CCDC7-201ENST00000277657 RARSP54136 660 aaKnown RBP28.63■■■□□ 2.17
CCDC7-201ENST00000277657 NPHP3Q7Z494 1330 aa28.62■■■□□ 2.17
CCDC7-201ENST00000277657 C20orf194Q5TEA3 1177 aa28.61■■■□□ 2.17
CCDC7-201ENST00000277657 ARHGEF25Q86VW2 580 aa28.59■■■□□ 2.17
CCDC7-201ENST00000277657 CRBNQ96SW2 442 aa28.59■■■□□ 2.17
CCDC7-201ENST00000277657 PXDNQ92626 1479 aa28.58■■■□□ 2.17
CCDC7-201ENST00000277657 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
CCDC7-201ENST00000277657 LMOD2Q6P5Q4 547 aa28.58■■■□□ 2.17
CCDC7-201ENST00000277657 CCDC136Q96JN2 1154 aa28.57■■■□□ 2.16
CCDC7-201ENST00000277657 IFT57Q9NWB7 429 aa28.57■■■□□ 2.16
CCDC7-201ENST00000277657 ZNF853P0CG23 659 aa28.57■■■□□ 2.16
CCDC7-201ENST00000277657 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
CCDC7-201ENST00000277657 THUMPD2Q9BTF0 503 aaKnown RBP28.57■■■□□ 2.16
CCDC7-201ENST00000277657 MED1Q15648 1581 aaPredicted RBP28.56■■■□□ 2.16
CCDC7-201ENST00000277657 GNAI1P63096 354 aa28.55■■■□□ 2.16
CCDC7-201ENST00000277657 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
CCDC7-201ENST00000277657 TNS3Q68CZ2 1445 aa28.54■■■□□ 2.16
CCDC7-201ENST00000277657 FAM83GA6ND36 823 aa28.53■■■□□ 2.16
CCDC7-201ENST00000277657 LTV1Q96GA3 475 aaPredicted RBP28.53■■■□□ 2.16
CCDC7-201ENST00000277657 PDE3AQ14432 1141 aa28.52■■■□□ 2.16
CCDC7-201ENST00000277657 CFAP44Q96MT7 982 aa28.52■■■□□ 2.16
CCDC7-201ENST00000277657 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
CCDC7-201ENST00000277657 SLAIN2Q9P270 581 aa28.51■■■□□ 2.15
CCDC7-201ENST00000277657 SPATA31A3Q5VYP0 1347 aa28.5■■■□□ 2.15
CCDC7-201ENST00000277657 DCTN1Q14203 1278 aa28.49■■■□□ 2.15
CCDC7-201ENST00000277657 GAS2L2Q8NHY3 880 aa28.49■■■□□ 2.15
CCDC7-201ENST00000277657 LAS1LQ9Y4W2 734 aaKnown RBP28.49■■■□□ 2.15
CCDC7-201ENST00000277657 MBIPQ9NS73 344 aa28.48■■■□□ 2.15
CCDC7-201ENST00000277657 CRYBG1Q9Y4K1 1723 aa28.47■■■□□ 2.15
CCDC7-201ENST00000277657 ZBTB7CA1YPR0 619 aa28.46■■■□□ 2.15
CCDC7-201ENST00000277657 NBPF6Q5VWK0 638 aa28.46■■■□□ 2.15
CCDC7-201ENST00000277657 NBPF4Q96M43 638 aa28.46■■■□□ 2.15
CCDC7-201ENST00000277657 NCAPD2Q15021 1401 aa28.46■■■□□ 2.15
CCDC7-201ENST00000277657 ZNF428Q96B54 188 aa28.46■■■□□ 2.15
CCDC7-201ENST00000277657 RGPD2P0DJD1 1756 aa28.45■■■□□ 2.15
CCDC7-201ENST00000277657 BCL2L13Q9BXK5 485 aa28.45■■■□□ 2.15
CCDC7-201ENST00000277657 CANXP27824 592 aaKnown RBP28.44■■■□□ 2.14
CCDC7-201ENST00000277657 PLEKHG5O94827 1062 aa28.44■■■□□ 2.14
CCDC7-201ENST00000277657 MCM10Q7L590 875 aa28.44■■■□□ 2.14
CCDC7-201ENST00000277657 FRAT1Q92837 279 aaPredicted RBP28.44■■■□□ 2.14
CCDC7-201ENST00000277657 CAMTA1Q9Y6Y1 1673 aa28.43■■■□□ 2.14
CCDC7-201ENST00000277657 CRB1P82279 1406 aa28.43■■■□□ 2.14
CCDC7-201ENST00000277657 HTATSF1O43719 755 aaKnown RBP28.43■■■□□ 2.14
CCDC7-201ENST00000277657 SSH1Q8WYL5 1049 aa28.43■■■□□ 2.14
CCDC7-201ENST00000277657 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
CCDC7-201ENST00000277657 USHBP1Q8N6Y0 703 aa28.42■■■□□ 2.14
CCDC7-201ENST00000277657 ALDH1L2Q3SY69 923 aa28.42■■■□□ 2.14
CCDC7-201ENST00000277657 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
CCDC7-201ENST00000277657 CHL1O00533 1208 aa28.41■■■□□ 2.14
CCDC7-201ENST00000277657 SMC4Q9NTJ3 1288 aa28.41■■■□□ 2.14
CCDC7-201ENST00000277657 ANKRD24Q8TF21 1146 aa28.4■■■□□ 2.14
CCDC7-201ENST00000277657 COL18A1P39060 1754 aa28.4■■■□□ 2.14
CCDC7-201ENST00000277657 RGPD5Q99666 1765 aa28.4■■■□□ 2.14
CCDC7-201ENST00000277657 ABCC6O95255 1503 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms