RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
CHRNA6-201ENST00000276410 IL16Q14005 1332 aa12.44□□□□□ -0.42
CHRNA6-201ENST00000276410 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 NME9Q86XW9 330 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 MRE11P49959 708 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 METP08581 1390 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 MED14O60244 1454 aa12.43□□□□□ -0.42
CHRNA6-201ENST00000276410 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
CHRNA6-201ENST00000276410 SSFA2P28290 1259 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 BMP2KLQ5H9B9 411 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 CLCN1P35523 988 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 AGLP35573 1532 aa12.41□□□□□ -0.42
CHRNA6-201ENST00000276410 VAMP4O75379 141 aa12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
CHRNA6-201ENST00000276410 ATP7BP35670 1465 aa12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 MBIPQ9NS73 344 aa12.39□□□□□ -0.43
CHRNA6-201ENST00000276410 DLC1Q96QB1 1528 aa12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 FAM83GA6ND36 823 aa12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 K7ELQ4 463 aaPredicted RBP12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 FCHSD2O94868 740 aa12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
CHRNA6-201ENST00000276410 ESPNB1AK53 854 aa12.37□□□□□ -0.43
CHRNA6-201ENST00000276410 C16orf71Q8IYS4 520 aaPredicted RBP12.37□□□□□ -0.43
CHRNA6-201ENST00000276410 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
CHRNA6-201ENST00000276410 NFE2L2Q16236 605 aa12.37□□□□□ -0.43
CHRNA6-201ENST00000276410 GBP4Q96PP9 640 aa12.37□□□□□ -0.43
CHRNA6-201ENST00000276410 CPS1P31327 1500 aa12.36□□□□□ -0.43
CHRNA6-201ENST00000276410 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
CHRNA6-201ENST00000276410 SOX12O15370 315 aa12.36□□□□□ -0.43
CHRNA6-201ENST00000276410 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
CHRNA6-201ENST00000276410 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
CHRNA6-201ENST00000276410 ABCC4O15439 1325 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 APBB1O00213 710 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 PKP1Q13835 747 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 COG3Q96JB2 828 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 CPSF1Q10570 1443 aaKnown RBP12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 TWISTNBQ3B726 338 aaPredicted RBP12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
CHRNA6-201ENST00000276410 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
CHRNA6-201ENST00000276410 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
CHRNA6-201ENST00000276410 CDC45O75419 566 aa12.33□□□□□ -0.43
CHRNA6-201ENST00000276410 IL13P35225 146 aa12.33□□□□□ -0.43
CHRNA6-201ENST00000276410 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.43
CHRNA6-201ENST00000276410 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.43
CHRNA6-201ENST00000276410 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.43
CHRNA6-201ENST00000276410 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
CHRNA6-201ENST00000276410 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
CHRNA6-201ENST00000276410 KIF13AQ9H1H9 1805 aa12.33□□□□□ -0.44
CHRNA6-201ENST00000276410 TNRQ92752 1358 aa12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 CDK12Q9NYV4 1490 aaPredicted RBP12.32□□□□□ -0.44
CHRNA6-201ENST00000276410 GNAI1P63096 354 aa12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 CEBPAP49715 358 aaPredicted RBP12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
CHRNA6-201ENST00000276410 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
CHRNA6-201ENST00000276410 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
CHRNA6-201ENST00000276410 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms