RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NUCB2P80303 420 aa15.7■□□□□ 0.1
HERC6-202ENST00000273960 PIK3C2GO75747 1445 aa15.7■□□□□ 0.1
HERC6-202ENST00000273960 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
HERC6-202ENST00000273960 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
HERC6-202ENST00000273960 TERF1P54274 439 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 THUMPD2Q9BTF0 503 aaKnown RBP15.69■□□□□ 0.1
HERC6-202ENST00000273960 LRSAM1Q6UWE0 723 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 WDR63Q8IWG1 891 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 PDLIM2Q96JY6 352 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 ZBTB40Q9NUA8 1239 aa15.69■□□□□ 0.1
HERC6-202ENST00000273960 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
HERC6-202ENST00000273960 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
HERC6-202ENST00000273960 OTUD7AQ8TE49 926 aaPredicted RBP15.68■□□□□ 0.1
HERC6-202ENST00000273960 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 PDCL2Q8N4E4 241 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
HERC6-202ENST00000273960 MYRIPQ8NFW9 859 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 KIF3AQ9Y496 699 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 SMARCA5O60264 1052 aaPredicted RBP15.67■□□□□ 0.1
HERC6-202ENST00000273960 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
HERC6-202ENST00000273960 TSPY26PQ9H489 355 aa15.67■□□□□ 0.1
HERC6-202ENST00000273960 CDC45O75419 566 aa15.66■□□□□ 0.1
HERC6-202ENST00000273960 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
HERC6-202ENST00000273960 FBLN1P23142 703 aa15.66■□□□□ 0.1
HERC6-202ENST00000273960 STAC3Q96MF2 364 aa15.66■□□□□ 0.1
HERC6-202ENST00000273960 BCL2L12Q9HB09 334 aa15.66■□□□□ 0.1
HERC6-202ENST00000273960 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
HERC6-202ENST00000273960 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
HERC6-202ENST00000273960 HS1BP3Q53T59 392 aa15.65■□□□□ 0.1
HERC6-202ENST00000273960 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
HERC6-202ENST00000273960 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
HERC6-202ENST00000273960 CHMP3Q9Y3E7 222 aa15.65■□□□□ 0.1
HERC6-202ENST00000273960 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.1
HERC6-202ENST00000273960 WAPLQ7Z5K2 1190 aa15.64■□□□□ 0.1
HERC6-202ENST00000273960 NEK4P51957 841 aa15.64■□□□□ 0.09
HERC6-202ENST00000273960 EVC2Q86UK5 1308 aa15.64■□□□□ 0.09
HERC6-202ENST00000273960 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
HERC6-202ENST00000273960 GSPT1P15170 499 aaKnown RBP15.63■□□□□ 0.09
HERC6-202ENST00000273960 IPO8O15397 1037 aaKnown RBP15.63■□□□□ 0.09
HERC6-202ENST00000273960 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 YEATS2Q9ULM3 1422 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 ADCY5O95622 1261 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 RABEP1Q15276 862 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
HERC6-202ENST00000273960 NPATQ14207 1427 aa15.62■□□□□ 0.09
HERC6-202ENST00000273960 ERICH4A6NGS2 130 aa15.62■□□□□ 0.09
HERC6-202ENST00000273960 ST18O60284 1047 aa15.62■□□□□ 0.09
HERC6-202ENST00000273960 NAA30Q147X3 362 aaPredicted RBP15.62■□□□□ 0.09
HERC6-202ENST00000273960 C14orf93Q9H972 538 aaKnown RBP15.62■□□□□ 0.09
HERC6-202ENST00000273960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.61■□□□□ 0.09
HERC6-202ENST00000273960 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
HERC6-202ENST00000273960 PLXNC1O60486 1568 aa15.61■□□□□ 0.09
HERC6-202ENST00000273960 IQGAP3Q86VI3 1631 aa15.61■□□□□ 0.09
HERC6-202ENST00000273960 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
HERC6-202ENST00000273960 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
HERC6-202ENST00000273960 UNC13BO14795 1591 aa15.61■□□□□ 0.09
HERC6-202ENST00000273960 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
HERC6-202ENST00000273960 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
HERC6-202ENST00000273960 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
HERC6-202ENST00000273960 NPHP1O15259 732 aa15.6■□□□□ 0.09
HERC6-202ENST00000273960 UTP14CQ5TAP6 766 aaKnown RBP15.6■□□□□ 0.09
HERC6-202ENST00000273960 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
HERC6-202ENST00000273960 TXNDC2Q86VQ3 553 aa15.59■□□□□ 0.09
HERC6-202ENST00000273960 ZNF592Q92610 1267 aa15.59■□□□□ 0.09
HERC6-202ENST00000273960 UPF3BQ9BZI7 483 aaKnown RBP15.59■□□□□ 0.09
HERC6-202ENST00000273960 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
HERC6-202ENST00000273960 SIRT2Q8IXJ6 389 aa15.59■□□□□ 0.09
HERC6-202ENST00000273960 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.09
HERC6-202ENST00000273960 KCNJ4P48050 445 aa15.58■□□□□ 0.09
HERC6-202ENST00000273960 CEBPAP49715 358 aaPredicted RBP15.58■□□□□ 0.09
HERC6-202ENST00000273960 CABP1Q9NZU7 370 aa15.58■□□□□ 0.09
HERC6-202ENST00000273960 MCM5P33992 734 aa15.58■□□□□ 0.08
HERC6-202ENST00000273960 TSPYL6Q8N831 410 aa15.58■□□□□ 0.08
HERC6-202ENST00000273960 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.08
HERC6-202ENST00000273960 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.08
HERC6-202ENST00000273960 USP26Q9BXU7 913 aa15.57■□□□□ 0.08
HERC6-202ENST00000273960 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
HERC6-202ENST00000273960 GTPBP4Q9BZE4 634 aaKnown RBP15.57■□□□□ 0.08
HERC6-202ENST00000273960 PYCARDQ9ULZ3 195 aa15.57■□□□□ 0.08
HERC6-202ENST00000273960 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
HERC6-202ENST00000273960 HMGN5P82970 282 aaKnown RBP15.56■□□□□ 0.08
HERC6-202ENST00000273960 HMOX1P09601 288 aa15.56■□□□□ 0.08
HERC6-202ENST00000273960 SLC52A1Q9NWF4 448 aa15.56■□□□□ 0.08
HERC6-202ENST00000273960 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
HERC6-202ENST00000273960 PIBF1Q8WXW3 757 aa15.56■□□□□ 0.08
HERC6-202ENST00000273960 TMEM51Q9NW97 253 aa15.56■□□□□ 0.08
HERC6-202ENST00000273960 IBTKQ9P2D0 1353 aaPredicted RBP15.56■□□□□ 0.08
HERC6-202ENST00000273960 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
HERC6-202ENST00000273960 FIBPO43427 364 aa15.55■□□□□ 0.08
HERC6-202ENST00000273960 C16orf45Q96MC5 204 aaPredicted RBP15.55■□□□□ 0.08
HERC6-202ENST00000273960 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
HERC6-202ENST00000273960 LETM1O95202 739 aaPredicted RBP15.55■□□□□ 0.08
HERC6-202ENST00000273960 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
HERC6-202ENST00000273960 DRC7Q8IY82 874 aa15.55■□□□□ 0.08
HERC6-202ENST00000273960 TMX3Q96JJ7 454 aa15.55■□□□□ 0.08
HERC6-202ENST00000273960 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms