RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
NXPE3-201ENST00000273347 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
NXPE3-201ENST00000273347 DIP2AQ14689 1571 aa17.37■□□□□ 0.37
NXPE3-201ENST00000273347 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
NXPE3-201ENST00000273347 RGS12O14924 1447 aa17.37■□□□□ 0.37
NXPE3-201ENST00000273347 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
NXPE3-201ENST00000273347 USP6P35125 1406 aa17.36■□□□□ 0.37
NXPE3-201ENST00000273347 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
NXPE3-201ENST00000273347 N4BP2Q86UW6 1770 aaPredicted RBP17.36■□□□□ 0.37
NXPE3-201ENST00000273347 NWD1Q149M9 1564 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
NXPE3-201ENST00000273347 VAMP4O75379 141 aa17.34■□□□□ 0.37
NXPE3-201ENST00000273347 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
NXPE3-201ENST00000273347 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
NXPE3-201ENST00000273347 THUMPD2Q9BTF0 503 aaKnown RBP17.34■□□□□ 0.37
NXPE3-201ENST00000273347 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.37
NXPE3-201ENST00000273347 BCL11AQ9H165 835 aa17.33■□□□□ 0.37
NXPE3-201ENST00000273347 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.37
NXPE3-201ENST00000273347 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.37
NXPE3-201ENST00000273347 HMOX1P09601 288 aa17.32■□□□□ 0.36
NXPE3-201ENST00000273347 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
NXPE3-201ENST00000273347 RRS1Q15050 365 aaKnown RBP17.31■□□□□ 0.36
NXPE3-201ENST00000273347 ABCC4O15439 1325 aa17.3■□□□□ 0.36
NXPE3-201ENST00000273347 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
NXPE3-201ENST00000273347 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
NXPE3-201ENST00000273347 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
NXPE3-201ENST00000273347 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
NXPE3-201ENST00000273347 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
NXPE3-201ENST00000273347 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
NXPE3-201ENST00000273347 ANTXR1Q9H6X2 564 aa17.29■□□□□ 0.36
NXPE3-201ENST00000273347 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
NXPE3-201ENST00000273347 CHD2O14647 1828 aaKnown RBP17.29■□□□□ 0.36
NXPE3-201ENST00000273347 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
NXPE3-201ENST00000273347 CRB1P82279 1406 aa17.28■□□□□ 0.36
NXPE3-201ENST00000273347 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
NXPE3-201ENST00000273347 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
NXPE3-201ENST00000273347 DDX19BQ9UMR2 479 aa17.28■□□□□ 0.36
NXPE3-201ENST00000273347 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
NXPE3-201ENST00000273347 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
NXPE3-201ENST00000273347 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.36
NXPE3-201ENST00000273347 FAM83GA6ND36 823 aa17.27■□□□□ 0.35
NXPE3-201ENST00000273347 NFKBIBQ15653 356 aa17.27■□□□□ 0.35
NXPE3-201ENST00000273347 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.35
NXPE3-201ENST00000273347 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.35
NXPE3-201ENST00000273347 NEFMP07197 916 aa17.26■□□□□ 0.35
NXPE3-201ENST00000273347 ACEP12821 1306 aa17.26■□□□□ 0.35
NXPE3-201ENST00000273347 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
NXPE3-201ENST00000273347 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
NXPE3-201ENST00000273347 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
NXPE3-201ENST00000273347 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
NXPE3-201ENST00000273347 LTN1O94822 1766 aa17.25■□□□□ 0.35
NXPE3-201ENST00000273347 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
NXPE3-201ENST00000273347 NUCB1Q02818 461 aa17.24■□□□□ 0.35
NXPE3-201ENST00000273347 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
NXPE3-201ENST00000273347 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
NXPE3-201ENST00000273347 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
NXPE3-201ENST00000273347 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
NXPE3-201ENST00000273347 KDRP35968 1356 aa17.24■□□□□ 0.35
NXPE3-201ENST00000273347 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
NXPE3-201ENST00000273347 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
NXPE3-201ENST00000273347 COG3Q96JB2 828 aa17.23■□□□□ 0.35
NXPE3-201ENST00000273347 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
NXPE3-201ENST00000273347 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
NXPE3-201ENST00000273347 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.35
NXPE3-201ENST00000273347 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
NXPE3-201ENST00000273347 GNAI1P63096 354 aa17.19■□□□□ 0.34
NXPE3-201ENST00000273347 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
NXPE3-201ENST00000273347 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
NXPE3-201ENST00000273347 KIF24Q5T7B8 1368 aa17.19■□□□□ 0.34
NXPE3-201ENST00000273347 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
NXPE3-201ENST00000273347 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
NXPE3-201ENST00000273347 CHL1O00533 1208 aa17.17■□□□□ 0.34
NXPE3-201ENST00000273347 NFAT5O94916 1531 aa17.17■□□□□ 0.34
NXPE3-201ENST00000273347 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
NXPE3-201ENST00000273347 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
NXPE3-201ENST00000273347 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
NXPE3-201ENST00000273347 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
NXPE3-201ENST00000273347 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
NXPE3-201ENST00000273347 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
NXPE3-201ENST00000273347 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
NXPE3-201ENST00000273347 TBX22Q9Y458 520 aa17.16■□□□□ 0.34
NXPE3-201ENST00000273347 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
NXPE3-201ENST00000273347 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
NXPE3-201ENST00000273347 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
NXPE3-201ENST00000273347 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
NXPE3-201ENST00000273347 DDIT3P35638 169 aa17.15■□□□□ 0.34
NXPE3-201ENST00000273347 KIF2CQ99661 725 aa17.15■□□□□ 0.34
NXPE3-201ENST00000273347 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 AMOTL2Q9Y2J4 779 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
NXPE3-201ENST00000273347 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
NXPE3-201ENST00000273347 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
NXPE3-201ENST00000273347 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms