RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PDCL3Q9H2J4 239 aa15.92■□□□□ 0.14
COL8A1-202ENST00000273342 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
COL8A1-202ENST00000273342 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
COL8A1-202ENST00000273342 MROH2AA6NES4 1674 aa15.92■□□□□ 0.14
COL8A1-202ENST00000273342 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
COL8A1-202ENST00000273342 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
COL8A1-202ENST00000273342 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
COL8A1-202ENST00000273342 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
COL8A1-202ENST00000273342 ATP7AQ04656 1500 aa15.91■□□□□ 0.14
COL8A1-202ENST00000273342 PTMSP20962 102 aa15.91■□□□□ 0.14
COL8A1-202ENST00000273342 GPT2Q8TD30 523 aa15.91■□□□□ 0.14
COL8A1-202ENST00000273342 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
COL8A1-202ENST00000273342 IL16Q14005 1332 aa15.9■□□□□ 0.14
COL8A1-202ENST00000273342 QRICH2Q9H0J4 1663 aa15.9■□□□□ 0.14
COL8A1-202ENST00000273342 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
COL8A1-202ENST00000273342 EMILIN1Q9Y6C2 1016 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 KIAA1210Q9ULL0 1709 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 UQCRHP07919 91 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 RABEP1Q15276 862 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 USP26Q9BXU7 913 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
COL8A1-202ENST00000273342 KIF1BO60333 1816 aa15.88■□□□□ 0.13
COL8A1-202ENST00000273342 NUCB2P80303 420 aa15.88■□□□□ 0.13
COL8A1-202ENST00000273342 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
COL8A1-202ENST00000273342 TMEM63CQ9P1W3 806 aa15.88■□□□□ 0.13
COL8A1-202ENST00000273342 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
COL8A1-202ENST00000273342 SDSP20132 328 aa15.88■□□□□ 0.13
COL8A1-202ENST00000273342 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.88■□□□□ 0.13
COL8A1-202ENST00000273342 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
COL8A1-202ENST00000273342 FCHSD2O94868 740 aa15.87■□□□□ 0.13
COL8A1-202ENST00000273342 TTC22Q5TAA0 569 aa15.87■□□□□ 0.13
COL8A1-202ENST00000273342 ZDHHC9Q9Y397 364 aa15.87■□□□□ 0.13
COL8A1-202ENST00000273342 TULP4Q9NRJ4 1543 aa15.87■□□□□ 0.13
COL8A1-202ENST00000273342 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
COL8A1-202ENST00000273342 SOX12O15370 315 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
COL8A1-202ENST00000273342 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 ZNF445P59923 1031 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 HDGFL2Q7Z4V5 671 aaPredicted RBP15.86■□□□□ 0.13
COL8A1-202ENST00000273342 NPATQ14207 1427 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 NSD2O96028 1365 aa15.86■□□□□ 0.13
COL8A1-202ENST00000273342 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 PRDM10Q9NQV6 1147 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 ST18O60284 1047 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 NEK4P51957 841 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
COL8A1-202ENST00000273342 TSC1Q92574 1164 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 CDK19Q9BWU1 502 aa15.85■□□□□ 0.13
COL8A1-202ENST00000273342 DTNBO60941 627 aa15.84■□□□□ 0.13
COL8A1-202ENST00000273342 NOL7Q9UMY1 257 aaKnown RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 ADGRB1O14514 1584 aa15.84■□□□□ 0.13
COL8A1-202ENST00000273342 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
COL8A1-202ENST00000273342 IDI1Q13907 227 aa15.84■□□□□ 0.13
COL8A1-202ENST00000273342 DNTTIP2Q5QJE6 756 aaKnown RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 GNAI1P63096 354 aa15.84■□□□□ 0.13
COL8A1-202ENST00000273342 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
COL8A1-202ENST00000273342 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
COL8A1-202ENST00000273342 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
COL8A1-202ENST00000273342 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
COL8A1-202ENST00000273342 CHMP4BQ9H444 224 aaKnown RBP15.82■□□□□ 0.12
COL8A1-202ENST00000273342 DCTPP1Q9H773 170 aa15.82■□□□□ 0.12
COL8A1-202ENST00000273342 PPRC1Q5VV67 1664 aaKnown RBP15.82■□□□□ 0.12
COL8A1-202ENST00000273342 EFCAB6Q5THR3 1501 aa15.82■□□□□ 0.12
COL8A1-202ENST00000273342 FAM177BA6PVY3 158 aa15.82■□□□□ 0.12
COL8A1-202ENST00000273342 CYP2E1P05181 493 aaPredicted RBP15.82■□□□□ 0.12
COL8A1-202ENST00000273342 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 ABCC4O15439 1325 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 VWDEQ8N2E2 1590 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 CASC1Q6TDU7 716 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 MEIS3Q99687 375 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 ZKSCAN5Q9Y2L8 839 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 ASXL2Q76L83 1435 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 MROH1Q8NDA8 1641 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
COL8A1-202ENST00000273342 API5Q9BZZ5 524 aaKnown RBP15.81■□□□□ 0.12
COL8A1-202ENST00000273342 COL3A1P02461 1466 aaPredicted RBP15.8■□□□□ 0.12
COL8A1-202ENST00000273342 PLCB2Q00722 1185 aa15.8■□□□□ 0.12
COL8A1-202ENST00000273342 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
COL8A1-202ENST00000273342 NME9Q86XW9 330 aa15.8■□□□□ 0.12
COL8A1-202ENST00000273342 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
COL8A1-202ENST00000273342 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
COL8A1-202ENST00000273342 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
COL8A1-202ENST00000273342 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
COL8A1-202ENST00000273342 ADGRB3O60242 1522 aa15.79■□□□□ 0.12
COL8A1-202ENST00000273342 NCKAP5LQ9HCH0 1330 aa15.79■□□□□ 0.12
COL8A1-202ENST00000273342 TMX3Q96JJ7 454 aa15.78■□□□□ 0.12
COL8A1-202ENST00000273342 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
COL8A1-202ENST00000273342 IFT57Q9NWB7 429 aa15.78■□□□□ 0.12
COL8A1-202ENST00000273342 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
COL8A1-202ENST00000273342 F6X3S4 739 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms