RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 TSPYL6Q8N831 410 aa23.25■■□□□ 1.31
CNIH3-201ENST00000272133 BRPF1P55201 1214 aaPredicted RBP23.25■■□□□ 1.31
CNIH3-201ENST00000272133 FCHSD2O94868 740 aa23.24■■□□□ 1.31
CNIH3-201ENST00000272133 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
CNIH3-201ENST00000272133 ATAD2Q6PL18 1390 aa23.24■■□□□ 1.31
CNIH3-201ENST00000272133 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
CNIH3-201ENST00000272133 VAMP4O75379 141 aa23.23■■□□□ 1.31
CNIH3-201ENST00000272133 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
CNIH3-201ENST00000272133 PTMSP20962 102 aa23.23■■□□□ 1.31
CNIH3-201ENST00000272133 HSP90AA2PQ14568 343 aaPredicted RBP23.23■■□□□ 1.31
CNIH3-201ENST00000272133 PRAM1Q96QH2 718 aa23.22■■□□□ 1.31
CNIH3-201ENST00000272133 FAM135BQ49AJ0 1406 aa23.22■■□□□ 1.31
CNIH3-201ENST00000272133 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
CNIH3-201ENST00000272133 PTCH1Q13635 1447 aa23.21■■□□□ 1.31
CNIH3-201ENST00000272133 PHACTR3Q96KR7 559 aa23.21■■□□□ 1.31
CNIH3-201ENST00000272133 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
CNIH3-201ENST00000272133 PTPRMP28827 1452 aa23.21■■□□□ 1.31
CNIH3-201ENST00000272133 HMOX1P09601 288 aa23.2■■□□□ 1.3
CNIH3-201ENST00000272133 IDI1Q13907 227 aa23.2■■□□□ 1.3
CNIH3-201ENST00000272133 AK9Q5TCS8 1911 aa23.2■■□□□ 1.3
CNIH3-201ENST00000272133 CDC45O75419 566 aa23.19■■□□□ 1.3
CNIH3-201ENST00000272133 GSPT1P15170 499 aaKnown RBP23.19■■□□□ 1.3
CNIH3-201ENST00000272133 ARHGAP45Q92619 1136 aa23.19■■□□□ 1.3
CNIH3-201ENST00000272133 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
CNIH3-201ENST00000272133 GOLGA6L22H0YM25 854 aa23.18■■□□□ 1.3
CNIH3-201ENST00000272133 RRP9O43818 475 aaKnown RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 BAG4O95429 457 aaKnown RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 NASPP49321 788 aaPredicted RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 HDGFL2Q7Z4V5 671 aaPredicted RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 CHMP4BQ9H444 224 aaKnown RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 DDX49Q9Y6V7 483 aaKnown RBP23.18■■□□□ 1.3
CNIH3-201ENST00000272133 ABCC4O15439 1325 aa23.18■■□□□ 1.3
CNIH3-201ENST00000272133 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
CNIH3-201ENST00000272133 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
CNIH3-201ENST00000272133 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
CNIH3-201ENST00000272133 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
CNIH3-201ENST00000272133 PREX1Q8TCU6 1659 aa23.17■■□□□ 1.3
CNIH3-201ENST00000272133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
CNIH3-201ENST00000272133 NFE2L2Q16236 605 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 KLHL40Q2TBA0 621 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 CLEC17AQ6ZS10 378 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 CCDC173Q0VFZ6 552 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 GLIPR1L2Q4G1C9 344 aa23.16■■□□□ 1.3
CNIH3-201ENST00000272133 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
CNIH3-201ENST00000272133 FBXO31Q5XUX0 539 aaPredicted RBP23.15■■□□□ 1.3
CNIH3-201ENST00000272133 KIF20BQ96Q89 1820 aa23.15■■□□□ 1.3
CNIH3-201ENST00000272133 PPP1R9BQ96SB3 815 aa23.14■■□□□ 1.29
CNIH3-201ENST00000272133 CDK19Q9BWU1 502 aa23.14■■□□□ 1.29
CNIH3-201ENST00000272133 CLTCQ00610 1675 aaKnown RBP23.14■■□□□ 1.29
CNIH3-201ENST00000272133 PLEKHM2Q8IWE5 1019 aa23.13■■□□□ 1.29
CNIH3-201ENST00000272133 YTHDC2Q9H6S0 1430 aaKnown RBP23.13■■□□□ 1.29
CNIH3-201ENST00000272133 GNAI1P63096 354 aa23.12■■□□□ 1.29
CNIH3-201ENST00000272133 TWISTNBQ3B726 338 aaPredicted RBP23.12■■□□□ 1.29
CNIH3-201ENST00000272133 IFT57Q9NWB7 429 aa23.12■■□□□ 1.29
CNIH3-201ENST00000272133 MCTP1Q6DN14 999 aa23.12■■□□□ 1.29
CNIH3-201ENST00000272133 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
CNIH3-201ENST00000272133 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
CNIH3-201ENST00000272133 REREQ9P2R6 1566 aa23.11■■□□□ 1.29
CNIH3-201ENST00000272133 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
CNIH3-201ENST00000272133 CALD1Q05682 793 aaKnown RBP23.1■■□□□ 1.29
CNIH3-201ENST00000272133 PKP1Q13835 747 aa23.1■■□□□ 1.29
CNIH3-201ENST00000272133 RABEP1Q15276 862 aa23.1■■□□□ 1.29
CNIH3-201ENST00000272133 ZNF853P0CG23 659 aa23.1■■□□□ 1.29
CNIH3-201ENST00000272133 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
CNIH3-201ENST00000272133 SLC52A1Q9NWF4 448 aa23.09■■□□□ 1.29
CNIH3-201ENST00000272133 TMEM131LA2VDJ0 1609 aa23.09■■□□□ 1.29
CNIH3-201ENST00000272133 ZSCAN30Q86W11 494 aa23.09■■□□□ 1.29
CNIH3-201ENST00000272133 ANP32BQ92688 251 aaKnown RBP23.09■■□□□ 1.29
CNIH3-201ENST00000272133 EMILIN1Q9Y6C2 1016 aa23.09■■□□□ 1.29
CNIH3-201ENST00000272133 TTC22Q5TAA0 569 aa23.08■■□□□ 1.29
CNIH3-201ENST00000272133 CAVIN1Q6NZI2 390 aaKnown RBP23.08■■□□□ 1.29
CNIH3-201ENST00000272133 VSIG10Q8N0Z9 540 aa23.08■■□□□ 1.29
CNIH3-201ENST00000272133 NCLP19338 710 aaKnown RBP23.08■■□□□ 1.29
CNIH3-201ENST00000272133 AGLP35573 1532 aa23.07■■□□□ 1.28
CNIH3-201ENST00000272133 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
CNIH3-201ENST00000272133 USP26Q9BXU7 913 aa23.07■■□□□ 1.28
CNIH3-201ENST00000272133 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
CNIH3-201ENST00000272133 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
CNIH3-201ENST00000272133 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
CNIH3-201ENST00000272133 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
CNIH3-201ENST00000272133 MAP2P11137 1827 aaKnown RBP23.06■■□□□ 1.28
CNIH3-201ENST00000272133 FAM83GA6ND36 823 aa23.06■■□□□ 1.28
CNIH3-201ENST00000272133 CYP2E1P05181 493 aaPredicted RBP23.06■■□□□ 1.28
CNIH3-201ENST00000272133 TPM2P07951 284 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 ZNF445P59923 1031 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 NUCB2P80303 420 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 ZSCAN23Q3MJ62 389 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 LMBRD1Q9NUN5 540 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
CNIH3-201ENST00000272133 IL13P35225 146 aa23.04■■□□□ 1.28
CNIH3-201ENST00000272133 MLECQ14165 292 aa23.03■■□□□ 1.28
CNIH3-201ENST00000272133 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
CNIH3-201ENST00000272133 ZGPATQ8N5A5 531 aaKnown RBP23.03■■□□□ 1.28
CNIH3-201ENST00000272133 MSNP26038 577 aaKnown RBP23.02■■□□□ 1.28
CNIH3-201ENST00000272133 INTS3Q68E01 1043 aaKnown RBP23.02■■□□□ 1.28
CNIH3-201ENST00000272133 DLG5Q8TDM6 1919 aa23.01■■□□□ 1.27
CNIH3-201ENST00000272133 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
CNIH3-201ENST00000272133 APBB1O00213 710 aa23.01■■□□□ 1.27
CNIH3-201ENST00000272133 RBSNQ9H1K0 784 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms