RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 CCDC9Q9Y3X0 531 aaKnown RBP5.82□□□□□ -1.48
HMCN1-201ENST00000271588 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 NUP160Q12769 1436 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 SOS1Q07889 1333 aaPredicted RBP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 GIGYF2Q6Y7W6 1299 aaKnown RBP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 GIMAP7Q8NHV1 300 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 NBPF1Q3BBV0 1214 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CCAR2Q8N163 923 aaKnown RBP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CRBNQ96SW2 442 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 ZBTB7CA1YPR0 619 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 ODF2Q5BJF6 829 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC91Q7Z6B0 441 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 PRXQ9BXM0 1461 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 DYDC1Q8WWB3 177 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CROCCP2Q86T23 111 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CRACR2AQ9BSW2 395 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 MYO1BO43795 1136 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 BMP15O95972 392 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 DDX19AQ9NUU7 478 aaKnown RBP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 BMS1Q14692 1282 aaKnown RBP5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC183Q5T5S1 534 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 SNAPC4Q5SXM2 1469 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 EPS15P42566 896 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 TEFQ10587 303 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 TRIM22Q8IYM9 498 aa5.81□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC150Q8NCX0 1101 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 RBM28Q9NW13 759 aaKnown RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 GRIN2BQ13224 1484 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 VPS36Q86VN1 386 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 ANO2Q9NQ90 1003 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 CT47A1Q5JQC4 288 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 C9orf78Q9NZ63 289 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 NKTRP30414 1462 aaKnown RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 AXDND1Q5T1B0 1012 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 KANK3Q6NY19 840 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 STMN4Q9H169 189 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 RAB11FIP3O75154 756 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 IL16Q14005 1332 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 KIF21AQ7Z4S6 1674 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 TRIM21P19474 475 aaKnown RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 CEP128Q6ZU80 1094 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 IGF1RP08069 1367 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 SFPQP23246 707 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 IRX3P78415 501 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 ATL3Q6DD88 541 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 EXOC6Q8TAG9 804 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 TAOK3Q9H2K8 898 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 LRRCC1Q9C099 1032 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 CYP46A1Q9Y6A2 500 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 NOL7Q9UMY1 257 aaKnown RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 SPECC1LQ69YQ0 1117 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 ANO10Q9NW15 660 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC30Q5VVM6 783 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 TTC5Q8N0Z6 440 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 R3HCC1Q9Y3T6 440 aaKnown RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 ZNF397Q8NF99 534 aaPredicted RBP5.8□□□□□ -1.48
HMCN1-201ENST00000271588 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
HMCN1-201ENST00000271588 ANAPC15P60006 121 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 KLHL40Q2TBA0 621 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 GCOM1H8Y6P7 765 aaPredicted RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 MYZAPP0CAP1 466 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 SMC1AQ14683 1233 aaKnown RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC196A0A1B0GTZ2 297 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 PLCD4Q9BRC7 762 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 CLSTN1O94985 981 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 CNPY4Q8N129 248 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 PUS7Q96PZ0 661 aaKnown RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 TBC1D2BQ9UPU7 963 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 NGDNQ8NEJ9 315 aaKnown RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 PPM1EQ8WY54 764 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 SSR1P43307 286 aaKnown RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 TIGD1Q96MW7 591 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 RNF214Q8ND24 703 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 MCTP1Q6DN14 999 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 ZNF692Q9BU19 519 aaPredicted RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 CLUL1Q15846 466 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 ARFGAP2Q8N6H7 521 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 ZNF592Q92610 1267 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 LRRC27Q9C0I9 530 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 PPP1R12BO60237 982 aaPredicted RBP5.79□□□□□ -1.48
HMCN1-201ENST00000271588 SPRYD3Q8NCJ5 442 aa5.79□□□□□ -1.48
HMCN1-201ENST00000271588 CFTRP13569 1480 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CKAP4Q07065 602 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 ZMYM4Q5VZL5 1548 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC57Q2TAC2 916 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 IQCDQ96DY2 449 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 NDC80O14777 642 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 SYCP1Q15431 976 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PTPN14Q15678 1187 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PPP4R3BQ5MIZ7 849 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 ZNF287Q9HBT7 754 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC50Q8IVM0 306 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 JPH4Q96JJ6 628 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PLVAPQ9BX97 442 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 ITSN2Q9NZM3 1697 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PCMTD1Q96MG8 357 aaPredicted RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 TNMDQ9H2S6 317 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PRPF40AO75400 957 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms