RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 PPM1EQ8WY54 764 aa14.87□□□□□ -0.03
CDH11-201ENST00000268603 CETN2P41208 172 aa14.87□□□□□ -0.03
CDH11-201ENST00000268603 DACH1Q9UI36 760 aa14.87□□□□□ -0.03
CDH11-201ENST00000268603 NOL7Q9UMY1 257 aaKnown RBP14.87□□□□□ -0.03
CDH11-201ENST00000268603 NLRP6P59044 892 aa14.87□□□□□ -0.03
CDH11-201ENST00000268603 USP8P40818 1118 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 CABP4P57796 275 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 UACAQ9BZF9 1416 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
CDH11-201ENST00000268603 RBM10P98175 930 aaKnown RBP14.86□□□□□ -0.03
CDH11-201ENST00000268603 TICAM2Q86XR7 235 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
CDH11-201ENST00000268603 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
CDH11-201ENST00000268603 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 ABTB2Q8N961 1025 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 SLC26A8Q96RN1 970 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 SIL1Q9H173 461 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
CDH11-201ENST00000268603 TAF4BQ92750 862 aa14.86□□□□□ -0.03
CDH11-201ENST00000268603 EXOC6Q8TAG9 804 aa14.85□□□□□ -0.03
CDH11-201ENST00000268603 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
CDH11-201ENST00000268603 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
CDH11-201ENST00000268603 SSX2IPQ9Y2D8 614 aa14.85□□□□□ -0.03
CDH11-201ENST00000268603 GNAI1P63096 354 aa14.85□□□□□ -0.03
CDH11-201ENST00000268603 RAI14Q9P0K7 980 aa14.85□□□□□ -0.03
CDH11-201ENST00000268603 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
CDH11-201ENST00000268603 TDO2P48775 406 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 PODXL2Q9NZ53 605 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 UBE4AQ14139 1066 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
CDH11-201ENST00000268603 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 CCDC150Q8NCX0 1101 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
CDH11-201ENST00000268603 KIAA1328Q86T90 577 aa14.84□□□□□ -0.03
CDH11-201ENST00000268603 MAP3K9P80192 1104 aa14.83□□□□□ -0.03
CDH11-201ENST00000268603 FKBP4Q02790 459 aaKnown RBP eCLIP14.83□□□□□ -0.03
CDH11-201ENST00000268603 SMC1AQ14683 1233 aaKnown RBP14.83□□□□□ -0.03
CDH11-201ENST00000268603 CFAP45Q9UL16 551 aa14.83□□□□□ -0.03
CDH11-201ENST00000268603 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.03
CDH11-201ENST00000268603 LRRCC1Q9C099 1032 aa14.83□□□□□ -0.03
CDH11-201ENST00000268603 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
CDH11-201ENST00000268603 TATP17735 454 aaPredicted RBP14.83□□□□□ -0.04
CDH11-201ENST00000268603 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
CDH11-201ENST00000268603 KIF7Q2M1P5 1343 aa14.83□□□□□ -0.04
CDH11-201ENST00000268603 HIP1O00291 1037 aa14.83□□□□□ -0.04
CDH11-201ENST00000268603 ERLIN1O75477 346 aa14.83□□□□□ -0.04
CDH11-201ENST00000268603 MACROD2A1Z1Q3 448 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 MYL6BP14649 208 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 ME1P48163 572 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 ZNF354CQ86Y25 554 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 VTI1AQ96AJ9 217 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 FIBPO43427 364 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 PPP1R12BO60237 982 aaPredicted RBP14.82□□□□□ -0.04
CDH11-201ENST00000268603 PLEKHO1Q53GL0 409 aaPredicted RBP14.82□□□□□ -0.04
CDH11-201ENST00000268603 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
CDH11-201ENST00000268603 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
CDH11-201ENST00000268603 MAP4K4O95819 1239 aaPredicted RBP14.82□□□□□ -0.04
CDH11-201ENST00000268603 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
CDH11-201ENST00000268603 UBAC1Q9BSL1 405 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 TSPY26PQ9H489 355 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 GSTTP1A0A1W2PQM5 241 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 CDC45O75419 566 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 SERPINA10Q9UK55 444 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 ST20-MTHFSA0A0A6YYL1 179 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 SPATA24Q86W54 205 aa14.81□□□□□ -0.04
CDH11-201ENST00000268603 TRMT1LQ7Z2T5 733 aaKnown RBP14.8□□□□□ -0.04
CDH11-201ENST00000268603 IQCEQ6IPM2 695 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 CEP57L1Q8IYX8 460 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 L3MBTL2Q969R5 705 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 CTNNA2P26232 953 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 C22orf23Q9BZE7 217 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
CDH11-201ENST00000268603 ERICH4A6NGS2 130 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 LRP2BPQ9P2M1 347 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
CDH11-201ENST00000268603 ARL1P40616 181 aaPredicted RBP14.8□□□□□ -0.04
CDH11-201ENST00000268603 DHX8Q14562 1220 aaKnown RBP14.8□□□□□ -0.04
CDH11-201ENST00000268603 HOOK3Q86VS8 718 aa14.8□□□□□ -0.04
CDH11-201ENST00000268603 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
CDH11-201ENST00000268603 CAVIN1Q6NZI2 390 aaKnown RBP14.79□□□□□ -0.04
CDH11-201ENST00000268603 ZMYND15Q9H091 742 aa14.79□□□□□ -0.04
CDH11-201ENST00000268603 TNNT1P13805 278 aa14.79□□□□□ -0.04
CDH11-201ENST00000268603 LARP1Q6PKG0 1096 aaKnown RBP14.79□□□□□ -0.04
CDH11-201ENST00000268603 FERP16591 822 aa14.79□□□□□ -0.04
CDH11-201ENST00000268603 PKNOX2Q96KN3 472 aa14.79□□□□□ -0.04
CDH11-201ENST00000268603 SEC63Q9UGP8 760 aaKnown RBP14.78□□□□□ -0.04
CDH11-201ENST00000268603 ZSCAN25Q6NSZ9 544 aa14.78□□□□□ -0.04
CDH11-201ENST00000268603 POLR3DP05423 398 aaPredicted RBP14.78□□□□□ -0.04
CDH11-201ENST00000268603 ZWINTO95229 277 aa14.78□□□□□ -0.04
CDH11-201ENST00000268603 PDCP20941 246 aa14.78□□□□□ -0.04
CDH11-201ENST00000268603 FEZ1Q99689 392 aa14.77□□□□□ -0.04
CDH11-201ENST00000268603 CCDC178Q5BJE1 867 aa14.77□□□□□ -0.05
CDH11-201ENST00000268603 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.05
CDH11-201ENST00000268603 NEK4P51957 841 aa14.77□□□□□ -0.05
CDH11-201ENST00000268603 ZNF397Q8NF99 534 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms