RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RCAN3Q9UKA8 241 aa21.49■■□□□ 1.03
TPM1-201ENST00000267996 PRKAR2BP31323 418 aa21.48■■□□□ 1.03
TPM1-201ENST00000267996 NEUROD2Q15784 382 aa21.47■■□□□ 1.03
TPM1-201ENST00000267996 SLIT3O75094 1523 aa21.47■■□□□ 1.03
TPM1-201ENST00000267996 ERICH6BQ5W0A0 696 aa21.47■■□□□ 1.03
TPM1-201ENST00000267996 HMOX1P09601 288 aa21.46■■□□□ 1.03
TPM1-201ENST00000267996 AMPHP49418 695 aa21.46■■□□□ 1.03
TPM1-201ENST00000267996 XPCQ01831 940 aaPredicted RBP21.46■■□□□ 1.03
TPM1-201ENST00000267996 KCNH5Q8NCM2 988 aa21.46■■□□□ 1.03
TPM1-201ENST00000267996 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
TPM1-201ENST00000267996 ALS2Q96Q42 1657 aa21.46■■□□□ 1.03
TPM1-201ENST00000267996 USP19O94966 1318 aa21.45■■□□□ 1.02
TPM1-201ENST00000267996 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
TPM1-201ENST00000267996 PHRF1Q9P1Y6 1649 aaKnown RBP21.44■■□□□ 1.02
TPM1-201ENST00000267996 NPHP3Q7Z494 1330 aa21.44■■□□□ 1.02
TPM1-201ENST00000267996 ARHGEF10O15013 1369 aa21.44■■□□□ 1.02
TPM1-201ENST00000267996 HOXC9P31274 260 aa21.44■■□□□ 1.02
TPM1-201ENST00000267996 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
TPM1-201ENST00000267996 NEFMP07197 916 aa21.42■■□□□ 1.02
TPM1-201ENST00000267996 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
TPM1-201ENST00000267996 PXDNQ92626 1479 aa21.42■■□□□ 1.02
TPM1-201ENST00000267996 LTN1O94822 1766 aa21.42■■□□□ 1.02
TPM1-201ENST00000267996 RIPK4P57078 832 aa21.41■■□□□ 1.02
TPM1-201ENST00000267996 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
TPM1-201ENST00000267996 IL16Q14005 1332 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 KDRP35968 1356 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 GCP02774 474 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 RRP1P56182 461 aaKnown RBP21.4■■□□□ 1.02
TPM1-201ENST00000267996 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 IP6K1Q92551 441 aa21.4■■□□□ 1.02
TPM1-201ENST00000267996 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
TPM1-201ENST00000267996 SLAIN2Q9P270 581 aa21.39■■□□□ 1.01
TPM1-201ENST00000267996 IGSF1Q8N6C5 1336 aa21.39■■□□□ 1.01
TPM1-201ENST00000267996 ARHGEF25Q86VW2 580 aa21.37■■□□□ 1.01
TPM1-201ENST00000267996 DDX17Q92841 729 aaKnown RBP21.37■■□□□ 1.01
TPM1-201ENST00000267996 EYA1Q99502 592 aa21.37■■□□□ 1.01
TPM1-201ENST00000267996 TNS3Q68CZ2 1445 aa21.37■■□□□ 1.01
TPM1-201ENST00000267996 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
TPM1-201ENST00000267996 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
TPM1-201ENST00000267996 SPATA31A3Q5VYP0 1347 aa21.35■■□□□ 1.01
TPM1-201ENST00000267996 LMOD2Q6P5Q4 547 aa21.35■■□□□ 1.01
TPM1-201ENST00000267996 DLG5Q8TDM6 1919 aa21.33■■□□□ 1
TPM1-201ENST00000267996 SOS2Q07890 1332 aaPredicted RBP21.32■■□□□ 1
TPM1-201ENST00000267996 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
TPM1-201ENST00000267996 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
TPM1-201ENST00000267996 CRYBG1Q9Y4K1 1723 aa21.3■■□□□ 1
TPM1-201ENST00000267996 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
TPM1-201ENST00000267996 CALD1Q05682 793 aaKnown RBP21.29■■□□□ 1
TPM1-201ENST00000267996 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
TPM1-201ENST00000267996 NHSL1Q5SYE7 1610 aa21.27■■□□□ 1
TPM1-201ENST00000267996 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
TPM1-201ENST00000267996 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
TPM1-201ENST00000267996 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
TPM1-201ENST00000267996 ZNF853P0CG23 659 aa21.25■□□□□ 0.99
TPM1-201ENST00000267996 ABCC6O95255 1503 aa21.25■□□□□ 0.99
TPM1-201ENST00000267996 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
TPM1-201ENST00000267996 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
TPM1-201ENST00000267996 PLIN1O60240 522 aa21.24■□□□□ 0.99
TPM1-201ENST00000267996 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
TPM1-201ENST00000267996 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
TPM1-201ENST00000267996 COL18A1P39060 1754 aa21.24■□□□□ 0.99
TPM1-201ENST00000267996 CPDO75976 1380 aa21.23■□□□□ 0.99
TPM1-201ENST00000267996 ZBTB7CA1YPR0 619 aa21.23■□□□□ 0.99
TPM1-201ENST00000267996 RARSP54136 660 aaKnown RBP21.23■□□□□ 0.99
TPM1-201ENST00000267996 MTHFSDQ2M296 383 aaKnown RBP21.23■□□□□ 0.99
TPM1-201ENST00000267996 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.23■□□□□ 0.99
TPM1-201ENST00000267996 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
TPM1-201ENST00000267996 THUMPD2Q9BTF0 503 aaKnown RBP21.23■□□□□ 0.99
TPM1-201ENST00000267996 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
TPM1-201ENST00000267996 CAMTA1Q9Y6Y1 1673 aa21.22■□□□□ 0.99
TPM1-201ENST00000267996 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
TPM1-201ENST00000267996 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
TPM1-201ENST00000267996 GNAI1P63096 354 aa21.22■□□□□ 0.99
TPM1-201ENST00000267996 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
TPM1-201ENST00000267996 BCAR3O75815 825 aa21.21■□□□□ 0.99
TPM1-201ENST00000267996 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
TPM1-201ENST00000267996 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
TPM1-201ENST00000267996 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
TPM1-201ENST00000267996 CABLES1Q8TDN4 633 aa21.21■□□□□ 0.99
TPM1-201ENST00000267996 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
TPM1-201ENST00000267996 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
TPM1-201ENST00000267996 HTATSF1O43719 755 aaKnown RBP21.19■□□□□ 0.98
TPM1-201ENST00000267996 LMO7Q8WWI1 1683 aa21.19■□□□□ 0.98
TPM1-201ENST00000267996 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
TPM1-201ENST00000267996 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
TPM1-201ENST00000267996 LRRC59Q96AG4 307 aaKnown RBP21.18■□□□□ 0.98
TPM1-201ENST00000267996 ERBB3P21860 1342 aa21.18■□□□□ 0.98
TPM1-201ENST00000267996 EXOC6Q8TAG9 804 aa21.18■□□□□ 0.98
TPM1-201ENST00000267996 CRB1P82279 1406 aa21.17■□□□□ 0.98
TPM1-201ENST00000267996 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
TPM1-201ENST00000267996 MBIPQ9NS73 344 aa21.16■□□□□ 0.98
TPM1-201ENST00000267996 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
TPM1-201ENST00000267996 CHL1O00533 1208 aa21.15■□□□□ 0.98
TPM1-201ENST00000267996 MCM10Q7L590 875 aa21.15■□□□□ 0.98
TPM1-201ENST00000267996 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
TPM1-201ENST00000267996 ABCA3Q99758 1704 aa21.14■□□□□ 0.98
TPM1-201ENST00000267996 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.98
TPM1-201ENST00000267996 ZNF428Q96B54 188 aa21.14■□□□□ 0.97
TPM1-201ENST00000267996 CRBNQ96SW2 442 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms