RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 NME9Q86XW9 330 aa10.27□□□□□ -0.76
NEDD1-201ENST00000266742 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.76
NEDD1-201ENST00000266742 IL27Q8NEV9 243 aa10.27□□□□□ -0.76
NEDD1-201ENST00000266742 LRRC7Q96NW7 1537 aa10.27□□□□□ -0.77
NEDD1-201ENST00000266742 REREQ9P2R6 1566 aa10.27□□□□□ -0.77
NEDD1-201ENST00000266742 PHACTR3Q96KR7 559 aa10.27□□□□□ -0.77
NEDD1-201ENST00000266742 BMP2KLQ5H9B9 411 aa10.27□□□□□ -0.77
NEDD1-201ENST00000266742 KIF20BQ96Q89 1820 aa10.27□□□□□ -0.77
NEDD1-201ENST00000266742 ZBTB7BO15156 539 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-201ENST00000266742 ANTXR1Q9H6X2 564 aa10.26□□□□□ -0.77
NEDD1-201ENST00000266742 CDK12Q9NYV4 1490 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-201ENST00000266742 MBIPQ9NS73 344 aa10.26□□□□□ -0.77
NEDD1-201ENST00000266742 CPSF1Q10570 1443 aaKnown RBP10.26□□□□□ -0.77
NEDD1-201ENST00000266742 ELL2O00472 640 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-201ENST00000266742 SPATA31D1Q6ZQQ2 1576 aa10.25□□□□□ -0.77
NEDD1-201ENST00000266742 HSP90AA1P07900 732 aaKnown RBP10.25□□□□□ -0.77
NEDD1-201ENST00000266742 FBLN1P23142 703 aa10.25□□□□□ -0.77
NEDD1-201ENST00000266742 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
NEDD1-201ENST00000266742 THUMPD2Q9BTF0 503 aaKnown RBP10.25□□□□□ -0.77
NEDD1-201ENST00000266742 ZNF853P0CG23 659 aa10.24□□□□□ -0.77
NEDD1-201ENST00000266742 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
NEDD1-201ENST00000266742 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
NEDD1-201ENST00000266742 BRPF3Q9ULD4 1205 aa10.24□□□□□ -0.77
NEDD1-201ENST00000266742 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
NEDD1-201ENST00000266742 DDX11L8A8MPP1 907 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
NEDD1-201ENST00000266742 KIF24Q5T7B8 1368 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 PIK3R4Q99570 1358 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
NEDD1-201ENST00000266742 SNX21Q969T3 373 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 ABCC4O15439 1325 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 PTMSP20962 102 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 MCM4P33991 863 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 TSPYL6Q8N831 410 aa10.23□□□□□ -0.77
NEDD1-201ENST00000266742 METP08581 1390 aa10.22□□□□□ -0.77
NEDD1-201ENST00000266742 CIZ1Q9ULV3 898 aaPredicted RBP10.22□□□□□ -0.77
NEDD1-201ENST00000266742 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
NEDD1-201ENST00000266742 GBP4Q96PP9 640 aa10.21□□□□□ -0.77
NEDD1-201ENST00000266742 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
NEDD1-201ENST00000266742 GOLGA6L3A6NEY3 463 aa10.21□□□□□ -0.78
NEDD1-201ENST00000266742 CDC45O75419 566 aa10.21□□□□□ -0.78
NEDD1-201ENST00000266742 SULT6B1Q6IMI4 303 aa10.21□□□□□ -0.78
NEDD1-201ENST00000266742 C8orf58Q8NAV2 365 aa10.21□□□□□ -0.78
NEDD1-201ENST00000266742 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.78
NEDD1-201ENST00000266742 TNRQ92752 1358 aa10.2□□□□□ -0.78
NEDD1-201ENST00000266742 DIP2BQ9P265 1576 aa10.2□□□□□ -0.78
NEDD1-201ENST00000266742 TECPR2O15040 1411 aa10.2□□□□□ -0.78
NEDD1-201ENST00000266742 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
NEDD1-201ENST00000266742 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
NEDD1-201ENST00000266742 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
NEDD1-201ENST00000266742 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
NEDD1-201ENST00000266742 PTPRCP08575 1304 aa10.19□□□□□ -0.78
NEDD1-201ENST00000266742 MAP2P11137 1827 aaKnown RBP10.19□□□□□ -0.78
NEDD1-201ENST00000266742 TRAK2O60296 914 aa10.19□□□□□ -0.78
NEDD1-201ENST00000266742 HMMRO75330 724 aa10.19□□□□□ -0.78
NEDD1-201ENST00000266742 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
NEDD1-201ENST00000266742 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 GOLGA6L22H0YM25 854 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
NEDD1-201ENST00000266742 DCTN1Q14203 1278 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 ISY1Q9ULR0 285 aaKnown RBP10.18□□□□□ -0.78
NEDD1-201ENST00000266742 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 SKOR2Q2VWA4 1001 aaPredicted RBP10.18□□□□□ -0.78
NEDD1-201ENST00000266742 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 DCTPP1Q9H773 170 aa10.18□□□□□ -0.78
NEDD1-201ENST00000266742 KIAA0232Q92628 1395 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 ACEP12821 1306 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 FAM43AQ8N2R8 423 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 NCKAP5LQ9HCH0 1330 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 CHL1O00533 1208 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 RIMBP3CA6NJZ7 1639 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 RIMBP3BA6NNM3 1639 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 RIMBP3Q9UFD9 1639 aa10.17□□□□□ -0.78
NEDD1-201ENST00000266742 K7ELQ4 463 aaPredicted RBP10.17□□□□□ -0.78
NEDD1-201ENST00000266742 TSPOAP1O95153 1857 aa10.16□□□□□ -0.78
NEDD1-201ENST00000266742 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
NEDD1-201ENST00000266742 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
NEDD1-201ENST00000266742 TTC21AQ8NDW8 1320 aa10.16□□□□□ -0.78
NEDD1-201ENST00000266742 GZF1Q9H116 711 aaPredicted RBP10.16□□□□□ -0.78
NEDD1-201ENST00000266742 CPS1P31327 1500 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 PRR36Q9H6K5 1346 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 RABEP1Q15276 862 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 STK31Q9BXU1 1019 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 SETD1AO15047 1707 aaKnown RBP10.15□□□□□ -0.78
NEDD1-201ENST00000266742 MRE11P49959 708 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 AEBP1Q8IUX7 1158 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
NEDD1-201ENST00000266742 NUTM2FA1L443 756 aa10.15□□□□□ -0.79
NEDD1-201ENST00000266742 MCM10Q7L590 875 aa10.15□□□□□ -0.79
NEDD1-201ENST00000266742 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.79
NEDD1-201ENST00000266742 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 AMPHP49418 695 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
NEDD1-201ENST00000266742 TTC22Q5TAA0 569 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 PLEKHM2Q8IWE5 1019 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 KNDC1Q76NI1 1749 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 SOX12O15370 315 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 TSPYL4Q9UJ04 414 aa10.14□□□□□ -0.79
NEDD1-201ENST00000266742 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms