RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 TTLL5Q6EMB2 1281 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 RPGRIP1LQ68CZ1 1315 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 SURF6O75683 361 aaKnown RBP8.05□□□□□ -1.12
SLF1-201ENST00000265140 C1orf141Q5JVX7 400 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 DDX23Q9BUQ8 820 aaKnown RBP8.05□□□□□ -1.12
SLF1-201ENST00000265140 THOC2Q8NI27 1593 aaKnown RBP8.05□□□□□ -1.12
SLF1-201ENST00000265140 ERICH2A1L162 156 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 PPM1FP49593 454 aaPredicted RBP8.05□□□□□ -1.12
SLF1-201ENST00000265140 UBTFL1P0CB47 393 aaPredicted RBP8.04□□□□□ -1.12
SLF1-201ENST00000265140 TAX1BP1Q86VP1 789 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CCDC112Q8NEF3 446 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 KIF21AQ7Z4S6 1674 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 NEBLO76041 1014 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CCDC175P0C221 793 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CHD1LQ86WJ1 897 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CFAP57Q96MR6 1250 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
SLF1-201ENST00000265140 CIZ1Q9ULV3 898 aaPredicted RBP8.04□□□□□ -1.12
SLF1-201ENST00000265140 SMC3Q9UQE7 1217 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CCDC61Q9Y6R9 512 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 SNAPC4Q5SXM2 1469 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
SLF1-201ENST00000265140 SLC4A2P04920 1241 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 ARHGEF11O15085 1522 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 VPS37CA5D8V6 355 aaPredicted RBP8.04□□□□□ -1.12
SLF1-201ENST00000265140 MBD3O95983 291 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 MCM2P49736 904 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 G3BP1Q13283 466 aaKnown RBP eCLIP8.04□□□□□ -1.12
SLF1-201ENST00000265140 TMEM57Q8N5G2 664 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 RNF214Q8ND24 703 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 CDK19Q9BWU1 502 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
SLF1-201ENST00000265140 RNF20Q5VTR2 975 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 SMARCE1Q969G3 411 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 NAT10Q9H0A0 1025 aaKnown RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 CCP110O43303 1012 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 DDX58O95786 925 aaKnown RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 GRIPAP1Q4V328 841 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 SAMD1Q6SPF0 538 aaPredicted RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 DEF6Q9H4E7 631 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 CAVIN1Q6NZI2 390 aaKnown RBP8.03□□□□□ -1.12
SLF1-201ENST00000265140 TXNDC2Q86VQ3 553 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 SAFBQ15424 915 aaKnown RBP eCLIP8.03□□□□□ -1.12
SLF1-201ENST00000265140 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
SLF1-201ENST00000265140 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.12
SLF1-201ENST00000265140 RPAP2Q8IXW5 612 aaPredicted RBP8.02□□□□□ -1.12
SLF1-201ENST00000265140 LRPPRCP42704 1394 aaKnown RBP8.02□□□□□ -1.13
SLF1-201ENST00000265140 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 ERC2O15083 957 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 ATAD2Q6PL18 1390 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 TRDNQ13061 729 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 CCDC73Q6ZRK6 1079 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 TESK2Q96S53 571 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 THUMPD2Q9BTF0 503 aaKnown RBP8.02□□□□□ -1.13
SLF1-201ENST00000265140 PTPN23Q9H3S7 1636 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 BRMS1Q9HCU9 246 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 IQGAP2Q13576 1575 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 PRPF40AO75400 957 aaKnown RBP8.02□□□□□ -1.13
SLF1-201ENST00000265140 PSME1Q06323 249 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 CENPHQ9H3R5 247 aa8.02□□□□□ -1.13
SLF1-201ENST00000265140 CCDC30Q5VVM6 783 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 NSD3Q9BZ95 1437 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 K7ELQ4 463 aaPredicted RBP8.01□□□□□ -1.13
SLF1-201ENST00000265140 GNAI2P04899 355 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 MAGEC2Q9UBF1 373 aaPredicted RBP8.01□□□□□ -1.13
SLF1-201ENST00000265140 CAMSAP2Q08AD1 1489 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 PDCL3Q9H2J4 239 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 GOLGA6L10A0A0M3HER8 536 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 FEZ1Q99689 392 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
SLF1-201ENST00000265140 ESPNB1AK53 854 aa8□□□□□ -1.13
SLF1-201ENST00000265140 VPS37DQ86XT2 251 aa8□□□□□ -1.13
SLF1-201ENST00000265140 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
SLF1-201ENST00000265140 DESP17661 470 aa8□□□□□ -1.13
SLF1-201ENST00000265140 IDI1Q13907 227 aa8□□□□□ -1.13
SLF1-201ENST00000265140 HDGFL1Q5TGJ6 251 aa8□□□□□ -1.13
SLF1-201ENST00000265140 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
SLF1-201ENST00000265140 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
SLF1-201ENST00000265140 TRIM27P14373 513 aa8□□□□□ -1.13
SLF1-201ENST00000265140 TTC5Q8N0Z6 440 aa8□□□□□ -1.13
SLF1-201ENST00000265140 CCDC181Q5TID7 509 aa8□□□□□ -1.13
SLF1-201ENST00000265140 IGHDP01880 384 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 FILIP1LQ4L180 1135 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
SLF1-201ENST00000265140 NKTRP30414 1462 aaKnown RBP7.99□□□□□ -1.13
SLF1-201ENST00000265140 TICAM2Q86XR7 235 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 GRPEL1Q9HAV7 217 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
SLF1-201ENST00000265140 CCT4P50991 539 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms