RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DNAJC21Q5F1R6 531 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 CEP131Q9UPN4 1083 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 BMS1Q14692 1282 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 MIA2Q96PC5 1412 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 PAFAH1B1P43034 410 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 MPHOSPH9Q99550 1183 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 PRKRIP1Q9H875 184 aaPredicted RBP6.4□□□□□ -1.38
XRN1-201ENST00000264951 PAXBP1Q9Y5B6 917 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 PTPN14Q15678 1187 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 CCDC110Q8TBZ0 833 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
XRN1-201ENST00000264951 RAB3GAP2Q9H2M9 1393 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 AIMP1Q12904 312 aaKnown RBP6.4□□□□□ -1.38
XRN1-201ENST00000264951 SPA17Q15506 151 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 COG3Q96JB2 828 aa6.4□□□□□ -1.38
XRN1-201ENST00000264951 ZNF330Q9Y3S2 320 aaPredicted RBP6.4□□□□□ -1.38
XRN1-201ENST00000264951 CCDC6Q16204 474 aa6.4□□□□□ -1.39
XRN1-201ENST00000264951 GTPBP4Q9BZE4 634 aaKnown RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 CENPHQ9H3R5 247 aa6.4□□□□□ -1.39
XRN1-201ENST00000264951 SMARCC1Q92922 1105 aaPredicted RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 BRD4O60885 1362 aaPredicted RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 GOLIM4O00461 696 aa6.4□□□□□ -1.39
XRN1-201ENST00000264951 USO1O60763 962 aaKnown RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 KRT18P05783 430 aaKnown RBP6.4□□□□□ -1.39
XRN1-201ENST00000264951 ANKS4BQ8N8V4 417 aa6.4□□□□□ -1.39
XRN1-201ENST00000264951 FERP16591 822 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 CPSF2Q9P2I0 782 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 LRRFIP2Q9Y608 721 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 DHX29Q7Z478 1369 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 NACAP1Q9BZK3 213 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.39□□□□□ -1.396e-7■■■□□ 16.2
XRN1-201ENST00000264951 PRPF40AO75400 957 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 UPF3BQ9BZI7 483 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 ZSCAN25Q6NSZ9 544 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 A0A1B0GUA9 196 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 RUNDC1Q96C34 613 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 CTNNA3Q9UI47 895 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 NBPF1Q3BBV0 1214 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 ALS2CR12Q96Q35 445 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
XRN1-201ENST00000264951 CYP46A1Q9Y6A2 500 aa6.39□□□□□ -1.39
XRN1-201ENST00000264951 MNAT1P51948 309 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 CCDC9Q9Y3X0 531 aaKnown RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 CEP83Q9Y592 693 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 NOL3O60936 208 aaKnown RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 ZFYP08048 801 aaPredicted RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 PRKCSHP14314 528 aaPredicted RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 IFI16Q16666 785 aaKnown RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 GNL3LQ9NVN8 582 aaKnown RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 FSD2A1L4K1 749 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 IFFO1Q0D2I5 559 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 VGFO15240 615 aaPredicted RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 ARFGAP2Q8N6H7 521 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 NUP62CLQ9H1M0 184 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 KIF4AO95239 1232 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 C10orf67Q8IYJ2 551 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 NGDNQ8NEJ9 315 aaKnown RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 RNF214Q8ND24 703 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 TTC12Q9H892 705 aaPredicted RBP6.38□□□□□ -1.39
XRN1-201ENST00000264951 PLEKHG5O94827 1062 aa6.38□□□□□ -1.39
XRN1-201ENST00000264951 SH2D4BQ5SQS7 431 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 CARMIL1Q5VZK9 1371 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 PRPHP41219 470 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 FKBP15Q5T1M5 1219 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 FMNL3Q8IVF7 1028 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 KRT222Q8N1A0 295 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 CCDC172P0C7W6 258 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 LRRC45Q96CN5 670 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 ANO10Q9NW15 660 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 PAK3O75914 559 aaPredicted RBP6.37□□□□□ -1.39
XRN1-201ENST00000264951 MAP4K4O95819 1239 aaPredicted RBP6.37□□□□□ -1.39
XRN1-201ENST00000264951 ANAPC15P60006 121 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 IRX3P78415 501 aaPredicted RBP6.37□□□□□ -1.39
XRN1-201ENST00000264951 UBE2Q2Q8WVN8 375 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 CRBNQ96SW2 442 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 CKAP4Q07065 602 aaKnown RBP6.37□□□□□ -1.39
XRN1-201ENST00000264951 CETN1Q12798 172 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 RAB34Q9BZG1 259 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 K7ELQ4 463 aaPredicted RBP6.37□□□□□ -1.39
XRN1-201ENST00000264951 COG6Q9Y2V7 657 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 CCDC50Q8IVM0 306 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 ME1P48163 572 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 FBF1Q8TES7 1133 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
XRN1-201ENST00000264951 UBTFL1P0CB47 393 aaPredicted RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 HS1BP3Q53T59 392 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 RSRC1Q96IZ7 334 aaKnown RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 STIM2Q9P246 746 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 NEBLO76041 1014 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 CEP128Q6ZU80 1094 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 CNGA1P29973 690 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 NEK4P51957 841 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 DIAPH1O60610 1272 aaKnown RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 TACC1O75410 805 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms