RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
SNX25-201ENST00000264694 ZNF445P59923 1031 aa16.37■□□□□ 0.21
SNX25-201ENST00000264694 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
SNX25-201ENST00000264694 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 EFCAB6Q5THR3 1501 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 VAMP4O75379 141 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 NEURL4Q96JN8 1562 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 ZC3H13Q5T200 1668 aaKnown RBP16.36■□□□□ 0.21
SNX25-201ENST00000264694 FANCAO15360 1455 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 RABEP1Q15276 862 aa16.36■□□□□ 0.21
SNX25-201ENST00000264694 OTUD7AQ8TE49 926 aaPredicted RBP16.36■□□□□ 0.21
SNX25-201ENST00000264694 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.36■□□□□ 0.21
SNX25-201ENST00000264694 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
SNX25-201ENST00000264694 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 CHD1O14646 1710 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 NUCB2P80303 420 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
SNX25-201ENST00000264694 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
SNX25-201ENST00000264694 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
SNX25-201ENST00000264694 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
SNX25-201ENST00000264694 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
SNX25-201ENST00000264694 UQCRHLA0A096LP55 91 aa16.34■□□□□ 0.21
SNX25-201ENST00000264694 UQCRHP07919 91 aa16.34■□□□□ 0.21
SNX25-201ENST00000264694 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
SNX25-201ENST00000264694 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
SNX25-201ENST00000264694 INO80Q9ULG1 1556 aaPredicted RBP16.33■□□□□ 0.2
SNX25-201ENST00000264694 MED14O60244 1454 aa16.33■□□□□ 0.2
SNX25-201ENST00000264694 SYCE3A1L190 88 aa16.33■□□□□ 0.2
SNX25-201ENST00000264694 USP26Q9BXU7 913 aa16.32■□□□□ 0.2
SNX25-201ENST00000264694 CYP2E1P05181 493 aaPredicted RBP16.32■□□□□ 0.2
SNX25-201ENST00000264694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX25-201ENST00000264694 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
SNX25-201ENST00000264694 NPATQ14207 1427 aa16.31■□□□□ 0.2
SNX25-201ENST00000264694 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
SNX25-201ENST00000264694 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
SNX25-201ENST00000264694 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
SNX25-201ENST00000264694 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
SNX25-201ENST00000264694 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 FCHSD2O94868 740 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
SNX25-201ENST00000264694 MPNDQ8N594 471 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 C8orf58Q8NAV2 365 aa16.3■□□□□ 0.2
SNX25-201ENST00000264694 GLI2P10070 1586 aa16.29■□□□□ 0.2
SNX25-201ENST00000264694 ABCC4O15439 1325 aa16.29■□□□□ 0.2
SNX25-201ENST00000264694 ZNF500O60304 480 aaPredicted RBP16.29■□□□□ 0.2
SNX25-201ENST00000264694 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
SNX25-201ENST00000264694 SDSP20132 328 aa16.29■□□□□ 0.2
SNX25-201ENST00000264694 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
SNX25-201ENST00000264694 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
SNX25-201ENST00000264694 INTS3Q68E01 1043 aaKnown RBP16.28■□□□□ 0.2
SNX25-201ENST00000264694 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
SNX25-201ENST00000264694 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
SNX25-201ENST00000264694 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
SNX25-201ENST00000264694 ARHGAP45Q92619 1136 aa16.28■□□□□ 0.2
SNX25-201ENST00000264694 PTCH1Q13635 1447 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 ST18O60284 1047 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 NOL8Q76FK4 1167 aaKnown RBP16.27■□□□□ 0.2
SNX25-201ENST00000264694 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
SNX25-201ENST00000264694 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
SNX25-201ENST00000264694 ZNF428Q96B54 188 aa16.27■□□□□ 0.19
SNX25-201ENST00000264694 CABP1Q9NZU7 370 aa16.27■□□□□ 0.19
SNX25-201ENST00000264694 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 LRSAM1Q6UWE0 723 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 PPLO60437 1756 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 GNAI1P63096 354 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
SNX25-201ENST00000264694 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
SNX25-201ENST00000264694 TERF1P54274 439 aa16.25■□□□□ 0.19
SNX25-201ENST00000264694 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
SNX25-201ENST00000264694 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
SNX25-201ENST00000264694 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
SNX25-201ENST00000264694 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
SNX25-201ENST00000264694 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
SNX25-201ENST00000264694 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
SNX25-201ENST00000264694 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
SNX25-201ENST00000264694 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
SNX25-201ENST00000264694 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 PNPLA6Q8IY17 1366 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
SNX25-201ENST00000264694 NEK4P51957 841 aa16.22■□□□□ 0.19
SNX25-201ENST00000264694 ARAP3Q8WWN8 1544 aa16.22■□□□□ 0.19
SNX25-201ENST00000264694 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 TSC1Q92574 1164 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms