RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
ITGA6-201ENST00000264107 HS1BP3Q53T59 392 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 EFCAB2Q5VUJ9 269 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 UVSSAQ2YD98 709 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 CNTROBQ8N137 903 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 NFXL1Q6ZNB6 911 aa21.23■□□□□ 0.99
ITGA6-201ENST00000264107 CLASRPQ8N2M8 674 aaKnown RBP21.23■□□□□ 0.99
ITGA6-201ENST00000264107 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
ITGA6-201ENST00000264107 CCDC148Q8NFR7 591 aa21.22■□□□□ 0.99
ITGA6-201ENST00000264107 RBM27Q9P2N5 1060 aaKnown RBP21.22■□□□□ 0.99
ITGA6-201ENST00000264107 BAG4O95429 457 aaKnown RBP21.22■□□□□ 0.99
ITGA6-201ENST00000264107 ZNF330Q9Y3S2 320 aaPredicted RBP21.22■□□□□ 0.99
ITGA6-201ENST00000264107 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
ITGA6-201ENST00000264107 MLECQ14165 292 aa21.21■□□□□ 0.99
ITGA6-201ENST00000264107 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
ITGA6-201ENST00000264107 MCM3P25205 808 aa21.21■□□□□ 0.99
ITGA6-201ENST00000264107 SMTNL1A8MU46 457 aa21.21■□□□□ 0.99
ITGA6-201ENST00000264107 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
ITGA6-201ENST00000264107 CLGNO14967 610 aa21.2■□□□□ 0.98
ITGA6-201ENST00000264107 POTEB2H3BUK9 544 aa21.2■□□□□ 0.98
ITGA6-201ENST00000264107 LRSAM1Q6UWE0 723 aa21.2■□□□□ 0.98
ITGA6-201ENST00000264107 DACH1Q9UI36 760 aa21.2■□□□□ 0.98
ITGA6-201ENST00000264107 SNW1Q13573 536 aaKnown RBP21.19■□□□□ 0.98
ITGA6-201ENST00000264107 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
ITGA6-201ENST00000264107 EPB41L2O43491 1005 aaKnown RBP21.19■□□□□ 0.98
ITGA6-201ENST00000264107 MAGEC2Q9UBF1 373 aaPredicted RBP21.19■□□□□ 0.98
ITGA6-201ENST00000264107 A0A1B0GUL7 405 aa21.19■□□□□ 0.98
ITGA6-201ENST00000264107 CFAP100Q494V2 611 aa21.19■□□□□ 0.98
ITGA6-201ENST00000264107 KIF4BQ2VIQ3 1234 aa21.18■□□□□ 0.98
ITGA6-201ENST00000264107 CYP46A1Q9Y6A2 500 aa21.18■□□□□ 0.98
ITGA6-201ENST00000264107 MVPQ14764 893 aaKnown RBP21.18■□□□□ 0.98
ITGA6-201ENST00000264107 ZNF397Q8NF99 534 aaPredicted RBP21.18■□□□□ 0.98
ITGA6-201ENST00000264107 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
ITGA6-201ENST00000264107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.18■□□□□ 0.98
ITGA6-201ENST00000264107 SARNPP82979 210 aaKnown RBP21.17■□□□□ 0.98
ITGA6-201ENST00000264107 KIF5CO60282 957 aa21.17■□□□□ 0.98
ITGA6-201ENST00000264107 LUZP1Q86V48 1076 aa21.17■□□□□ 0.98
ITGA6-201ENST00000264107 HDGFP51858 240 aaKnown RBP21.17■□□□□ 0.98
ITGA6-201ENST00000264107 MAP2K1Q02750 393 aaPredicted RBP21.17■□□□□ 0.98
ITGA6-201ENST00000264107 CFAP45Q9UL16 551 aa21.17■□□□□ 0.98
ITGA6-201ENST00000264107 GOLGA6L10A0A0M3HER8 536 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 FKBP5Q13451 457 aaPredicted RBP21.16■□□□□ 0.98
ITGA6-201ENST00000264107 GNAI1P63096 354 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 KIAA1328Q86T90 577 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 EPS15P42566 896 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.981e-6■■■■□ 22.9
ITGA6-201ENST00000264107 CAPN2P17655 700 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 G3BP1Q13283 466 aaKnown RBP eCLIP21.16■□□□□ 0.98
ITGA6-201ENST00000264107 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
ITGA6-201ENST00000264107 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 C20orf194Q5TEA3 1177 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 CCDC171Q6TFL3 1326 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
ITGA6-201ENST00000264107 TCP11L2Q8N4U5 519 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 JMYQ8N9B5 988 aa21.15■□□□□ 0.98
ITGA6-201ENST00000264107 GBP6Q6ZN66 633 aa21.14■□□□□ 0.98
ITGA6-201ENST00000264107 RALYLQ86SE5 291 aaKnown RBP21.14■□□□□ 0.98
ITGA6-201ENST00000264107 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.98
ITGA6-201ENST00000264107 STK3Q13188 491 aa21.14■□□□□ 0.97
ITGA6-201ENST00000264107 TBC1D32Q96NH3 1257 aa21.14■□□□□ 0.97
ITGA6-201ENST00000264107 ARFGAP3Q9NP61 516 aa21.14■□□□□ 0.97
ITGA6-201ENST00000264107 EXOSC9Q06265 439 aaKnown RBP21.13■□□□□ 0.97
ITGA6-201ENST00000264107 GABPB1Q06547 395 aaPredicted RBP21.13■□□□□ 0.97
ITGA6-201ENST00000264107 DRC1Q96MC2 740 aa21.13■□□□□ 0.97
ITGA6-201ENST00000264107 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
ITGA6-201ENST00000264107 TERF1P54274 439 aa21.13■□□□□ 0.97
ITGA6-201ENST00000264107 GSDMDP57764 484 aa21.13■□□□□ 0.97
ITGA6-201ENST00000264107 SEPT7Q16181 437 aaKnown RBP21.13■□□□□ 0.97
ITGA6-201ENST00000264107 TTC12Q9H892 705 aaPredicted RBP21.13■□□□□ 0.97
ITGA6-201ENST00000264107 TMX1Q9H3N1 280 aa21.12■□□□□ 0.97
ITGA6-201ENST00000264107 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.12■□□□□ 0.97
ITGA6-201ENST00000264107 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
ITGA6-201ENST00000264107 V9GYY5 206 aaPredicted RBP21.12■□□□□ 0.97
ITGA6-201ENST00000264107 EZRP15311 586 aaKnown RBP21.12■□□□□ 0.97
ITGA6-201ENST00000264107 ANKRD1Q15327 319 aa21.12■□□□□ 0.97
ITGA6-201ENST00000264107 LUC7LQ9NQ29 371 aaKnown RBP21.12■□□□□ 0.97
ITGA6-201ENST00000264107 ANO10Q9NW15 660 aa21.12■□□□□ 0.97
ITGA6-201ENST00000264107 KRBA2Q6ZNG9 492 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 JPH4Q96JJ6 628 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 NECTIN2Q92692 538 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 CPSF2Q9P2I0 782 aaKnown RBP21.11■□□□□ 0.97
ITGA6-201ENST00000264107 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 CEP57Q86XR8 500 aa21.11■□□□□ 0.97
ITGA6-201ENST00000264107 KDM4AO75164 1064 aa21.1■□□□□ 0.97
ITGA6-201ENST00000264107 HCLS1P14317 486 aaPredicted RBP21.1■□□□□ 0.97
ITGA6-201ENST00000264107 ATP2B1P20020 1258 aa21.1■□□□□ 0.97
ITGA6-201ENST00000264107 ZSCAN31Q96LW9 406 aaPredicted RBP21.1■□□□□ 0.97
ITGA6-201ENST00000264107 CKAP2LQ8IYA6 745 aa21.1■□□□□ 0.97
ITGA6-201ENST00000264107 FSD1Q9BTV5 496 aa21.1■□□□□ 0.97
ITGA6-201ENST00000264107 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.974e-7■■□□□ 11.9
ITGA6-201ENST00000264107 BANK1Q8NDB2 785 aa21.09■□□□□ 0.97
ITGA6-201ENST00000264107 SLU7O95391 586 aaKnown RBP21.09■□□□□ 0.97
ITGA6-201ENST00000264107 ANKRD62A6NC57 917 aa21.09■□□□□ 0.97
ITGA6-201ENST00000264107 HSPA4P34932 840 aa21.09■□□□□ 0.97
ITGA6-201ENST00000264107 RAI14Q9P0K7 980 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms