RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
TNFRSF8-201ENST00000263932 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
TNFRSF8-201ENST00000263932 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 AGLP35573 1532 aa17.05■□□□□ 0.32
TNFRSF8-201ENST00000263932 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF8-201ENST00000263932 GNAI1P63096 354 aa17.04■□□□□ 0.32
TNFRSF8-201ENST00000263932 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF8-201ENST00000263932 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF8-201ENST00000263932 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
TNFRSF8-201ENST00000263932 ATF7IPQ6VMQ6 1270 aa17.03■□□□□ 0.32
TNFRSF8-201ENST00000263932 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
TNFRSF8-201ENST00000263932 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
TNFRSF8-201ENST00000263932 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
TNFRSF8-201ENST00000263932 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
TNFRSF8-201ENST00000263932 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.32
TNFRSF8-201ENST00000263932 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.32
TNFRSF8-201ENST00000263932 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.31
TNFRSF8-201ENST00000263932 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.31
TNFRSF8-201ENST00000263932 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
TNFRSF8-201ENST00000263932 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 A0A0G2JS52 829 aa17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
TNFRSF8-201ENST00000263932 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
TNFRSF8-201ENST00000263932 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
TNFRSF8-201ENST00000263932 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
TNFRSF8-201ENST00000263932 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
TNFRSF8-201ENST00000263932 NEURL4Q96JN8 1562 aa16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 INSRP06213 1382 aa16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 SPATA31D1Q6ZQQ2 1576 aa16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 MS4A1P11836 297 aa16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
TNFRSF8-201ENST00000263932 EYA1Q99502 592 aa16.98■□□□□ 0.31
TNFRSF8-201ENST00000263932 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
TNFRSF8-201ENST00000263932 CABLES1Q8TDN4 633 aa16.98■□□□□ 0.31
TNFRSF8-201ENST00000263932 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
TNFRSF8-201ENST00000263932 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
TNFRSF8-201ENST00000263932 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
TNFRSF8-201ENST00000263932 ATF3P18847 181 aa16.97■□□□□ 0.31
TNFRSF8-201ENST00000263932 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
TNFRSF8-201ENST00000263932 PLEKHG3A1L390 1219 aa16.97■□□□□ 0.31
TNFRSF8-201ENST00000263932 CPS1P31327 1500 aa16.96■□□□□ 0.31
TNFRSF8-201ENST00000263932 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
TNFRSF8-201ENST00000263932 F6X3S4 739 aa16.95■□□□□ 0.3
TNFRSF8-201ENST00000263932 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
TNFRSF8-201ENST00000263932 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
TNFRSF8-201ENST00000263932 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
TNFRSF8-201ENST00000263932 SEC24BO95487 1268 aa16.94■□□□□ 0.3
TNFRSF8-201ENST00000263932 VAMP4O75379 141 aa16.93■□□□□ 0.3
TNFRSF8-201ENST00000263932 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
TNFRSF8-201ENST00000263932 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
TNFRSF8-201ENST00000263932 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
TNFRSF8-201ENST00000263932 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
TNFRSF8-201ENST00000263932 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
TNFRSF8-201ENST00000263932 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 ATP7BP35670 1465 aa16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
TNFRSF8-201ENST00000263932 ANXA1P04083 346 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 TEFQ10587 303 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 USP6P35125 1406 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 HOXC9P31274 260 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
TNFRSF8-201ENST00000263932 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
TNFRSF8-201ENST00000263932 GSE1Q14687 1217 aa16.88■□□□□ 0.29
TNFRSF8-201ENST00000263932 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF8-201ENST00000263932 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
TNFRSF8-201ENST00000263932 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
TNFRSF8-201ENST00000263932 BECN1Q14457 450 aa16.86■□□□□ 0.29
TNFRSF8-201ENST00000263932 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
TNFRSF8-201ENST00000263932 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 G2E3Q7L622 706 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 API5Q9BZZ5 524 aaKnown RBP16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 FLT4P35916 1363 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 GCP02774 474 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 ZNF330Q9Y3S2 320 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 IL16Q14005 1332 aa16.85■□□□□ 0.29
TNFRSF8-201ENST00000263932 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
TNFRSF8-201ENST00000263932 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
TNFRSF8-201ENST00000263932 CT47B1P0C2W7 299 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF8-201ENST00000263932 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
TNFRSF8-201ENST00000263932 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms