RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
CHMP2B-201ENST00000263780 MROH1Q8NDA8 1641 aa15.24■□□□□ 0.03
CHMP2B-201ENST00000263780 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
CHMP2B-201ENST00000263780 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
CHMP2B-201ENST00000263780 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
CHMP2B-201ENST00000263780 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
CHMP2B-201ENST00000263780 MRPL50Q8N5N7 158 aaKnown RBP15.23■□□□□ 0.03
CHMP2B-201ENST00000263780 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
CHMP2B-201ENST00000263780 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
CHMP2B-201ENST00000263780 KIF24Q5T7B8 1368 aa15.23■□□□□ 0.03
CHMP2B-201ENST00000263780 API5Q9BZZ5 524 aaKnown RBP15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 UQCRHLA0A096LP55 91 aa15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 MBD3O95983 291 aa15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 UQCRHP07919 91 aa15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
CHMP2B-201ENST00000263780 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.03
CHMP2B-201ENST00000263780 USP26Q9BXU7 913 aa15.21■□□□□ 0.03
CHMP2B-201ENST00000263780 ABCC4O15439 1325 aa15.21■□□□□ 0.03
CHMP2B-201ENST00000263780 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.02
CHMP2B-201ENST00000263780 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.02
CHMP2B-201ENST00000263780 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 PPLO60437 1756 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 VAMP4O75379 141 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 PRPF40AO75400 957 aaKnown RBP15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 GNAI1P63096 354 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 TTC22Q5TAA0 569 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 GGNBP2Q9H3C7 697 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
CHMP2B-201ENST00000263780 A0A1W2PP64 1363 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 REC8O95072 547 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 SMAP1Q8IYB5 467 aaPredicted RBP15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 DCTPP1Q9H773 170 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.19■□□□□ 0.02
CHMP2B-201ENST00000263780 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
CHMP2B-201ENST00000263780 XPCQ01831 940 aaPredicted RBP15.18■□□□□ 0.02
CHMP2B-201ENST00000263780 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
CHMP2B-201ENST00000263780 GLI2P10070 1586 aa15.17■□□□□ 0.02
CHMP2B-201ENST00000263780 FYB1O15117 783 aa15.17■□□□□ 0.02
CHMP2B-201ENST00000263780 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
CHMP2B-201ENST00000263780 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
CHMP2B-201ENST00000263780 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
CHMP2B-201ENST00000263780 MCM2P49736 904 aa15.16■□□□□ 0.02
CHMP2B-201ENST00000263780 GPT2Q8TD30 523 aa15.16■□□□□ 0.02
CHMP2B-201ENST00000263780 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
CHMP2B-201ENST00000263780 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
CHMP2B-201ENST00000263780 CHD1O14646 1710 aa15.16■□□□□ 0.02
CHMP2B-201ENST00000263780 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
CHMP2B-201ENST00000263780 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
CHMP2B-201ENST00000263780 PHF14O94880 888 aa15.15■□□□□ 0.02
CHMP2B-201ENST00000263780 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 HAP1P54257 671 aaPredicted RBP15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 PRDM4Q9UKN5 801 aa15.14■□□□□ 0.01
CHMP2B-201ENST00000263780 NPATQ14207 1427 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 ANKRD26Q9UPS8 1709 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 SYCE3A1L190 88 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 TSPY26PQ9H489 355 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
CHMP2B-201ENST00000263780 ERC2O15083 957 aa15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 PKP1Q13835 747 aa15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 ZDHHC9Q9Y397 364 aa15.12■□□□□ 0.01
CHMP2B-201ENST00000263780 FAM184AQ8NB25 1140 aa15.11■□□□□ 0.01
CHMP2B-201ENST00000263780 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
CHMP2B-201ENST00000263780 SDSP20132 328 aa15.11■□□□□ 0.01
CHMP2B-201ENST00000263780 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
CHMP2B-201ENST00000263780 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
CHMP2B-201ENST00000263780 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
CHMP2B-201ENST00000263780 TSPYL6Q8N831 410 aa15.1■□□□□ 0.01
CHMP2B-201ENST00000263780 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
CHMP2B-201ENST00000263780 MYRIPQ8NFW9 859 aa15.09■□□□□ 0.01
CHMP2B-201ENST00000263780 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
CHMP2B-201ENST00000263780 MCCP23508 829 aa15.08■□□□□ 0
CHMP2B-201ENST00000263780 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
CHMP2B-201ENST00000263780 BRD1O95696 1058 aa15.08■□□□□ 0
CHMP2B-201ENST00000263780 KLHL34Q8N239 644 aa15.08■□□□□ 0
CHMP2B-201ENST00000263780 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
CHMP2B-201ENST00000263780 DNTTIP2Q5QJE6 756 aaKnown RBP15.07■□□□□ 0
CHMP2B-201ENST00000263780 UTP14CQ5TAP6 766 aaKnown RBP15.07■□□□□ 0
CHMP2B-201ENST00000263780 AK9Q5TCS8 1911 aa15.07■□□□□ 0
CHMP2B-201ENST00000263780 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms