RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ESPNB1AK53 854 aa19.83■□□□□ 0.77
PDZRN3-201ENST00000263666 DTNBO60941 627 aa19.83■□□□□ 0.77
PDZRN3-201ENST00000263666 HDAC1Q13547 482 aaPredicted RBP19.83■□□□□ 0.77
PDZRN3-201ENST00000263666 UPF3BQ9BZI7 483 aaKnown RBP19.83■□□□□ 0.77
PDZRN3-201ENST00000263666 REC8O95072 547 aa19.83■□□□□ 0.76
PDZRN3-201ENST00000263666 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.76
PDZRN3-201ENST00000263666 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.76
PDZRN3-201ENST00000263666 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.76
PDZRN3-201ENST00000263666 INSRP06213 1382 aa19.83■□□□□ 0.76
PDZRN3-201ENST00000263666 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
PDZRN3-201ENST00000263666 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 FAM13BQ9NYF5 915 aa19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 RBM10P98175 930 aaKnown RBP19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
PDZRN3-201ENST00000263666 NLRP6P59044 892 aa19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 FGD1P98174 961 aa19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 NPC1L1Q9UHC9 1359 aa19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 CHAMP1Q96JM3 812 aa19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 RBM27Q9P2N5 1060 aaKnown RBP19.8■□□□□ 0.76
PDZRN3-201ENST00000263666 VAMP4O75379 141 aa19.79■□□□□ 0.76
PDZRN3-201ENST00000263666 MEIS3Q99687 375 aa19.79■□□□□ 0.76
PDZRN3-201ENST00000263666 R3HCC1Q9Y3T6 440 aaKnown RBP19.79■□□□□ 0.76
PDZRN3-201ENST00000263666 GDPD2Q9HCC8 539 aa19.79■□□□□ 0.76
PDZRN3-201ENST00000263666 ATP7AQ04656 1500 aa19.79■□□□□ 0.76
PDZRN3-201ENST00000263666 BMP2KLQ5H9B9 411 aa19.78■□□□□ 0.76
PDZRN3-201ENST00000263666 ADCY10Q96PN6 1610 aa19.78■□□□□ 0.76
PDZRN3-201ENST00000263666 ESCO1Q5FWF5 840 aa19.78■□□□□ 0.76
PDZRN3-201ENST00000263666 NUCB2P80303 420 aa19.77■□□□□ 0.76
PDZRN3-201ENST00000263666 ALDH1L2Q3SY69 923 aa19.77■□□□□ 0.76
PDZRN3-201ENST00000263666 ATF3P18847 181 aa19.77■□□□□ 0.76
PDZRN3-201ENST00000263666 RABEP1Q15276 862 aa19.77■□□□□ 0.76
PDZRN3-201ENST00000263666 CROCC2H7BZ55 1655 aa19.77■□□□□ 0.75
PDZRN3-201ENST00000263666 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
PDZRN3-201ENST00000263666 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-201ENST00000263666 SURF6O75683 361 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-201ENST00000263666 CD2BP2O95400 341 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-201ENST00000263666 PTMSP20962 102 aa19.76■□□□□ 0.75
PDZRN3-201ENST00000263666 FOXO3O43524 673 aa19.75■□□□□ 0.75
PDZRN3-201ENST00000263666 GOLGA6L4A6NEF3 574 aa19.75■□□□□ 0.75
PDZRN3-201ENST00000263666 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-201ENST00000263666 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
PDZRN3-201ENST00000263666 ZCCHC11Q5TAX3 1644 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 USHBP1Q8N6Y0 703 aa19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 SYCE3A1L190 88 aa19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 ZBTB7BO15156 539 aaPredicted RBP19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 ZGPATQ8N5A5 531 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 CFAP44Q96MT7 982 aa19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 PREX2Q70Z35 1606 aa19.74■□□□□ 0.75
PDZRN3-201ENST00000263666 IFT57Q9NWB7 429 aa19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 BAG4O95429 457 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 ANTXR1Q9H6X2 564 aa19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 TNRQ92752 1358 aa19.73■□□□□ 0.75
PDZRN3-201ENST00000263666 AMOTL2Q9Y2J4 779 aa19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 SDSP20132 328 aa19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 YEATS2Q9ULM3 1422 aa19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 ABCC11Q96J66 1382 aa19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 VPS37CA5D8V6 355 aaPredicted RBP19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
PDZRN3-201ENST00000263666 ERC2O15083 957 aa19.71■□□□□ 0.75
PDZRN3-201ENST00000263666 ZNF330Q9Y3S2 320 aaPredicted RBP19.71■□□□□ 0.75
PDZRN3-201ENST00000263666 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
PDZRN3-201ENST00000263666 FOSBP53539 338 aa19.71■□□□□ 0.75
PDZRN3-201ENST00000263666 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
PDZRN3-201ENST00000263666 WASLO00401 505 aaPredicted RBP19.7■□□□□ 0.74
PDZRN3-201ENST00000263666 FIBPO43427 364 aa19.69■□□□□ 0.74
PDZRN3-201ENST00000263666 ANXA1P04083 346 aa19.69■□□□□ 0.74
PDZRN3-201ENST00000263666 GNAI2P04899 355 aa19.69■□□□□ 0.74
PDZRN3-201ENST00000263666 NPATQ14207 1427 aa19.69■□□□□ 0.74
PDZRN3-201ENST00000263666 ZMYM3Q14202 1370 aa19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 CIZ1Q9ULV3 898 aaPredicted RBP19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 KDM5AP29375 1690 aaKnown RBP19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 TEFQ10587 303 aa19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
PDZRN3-201ENST00000263666 PKP1Q13835 747 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 GAS2L3Q86XJ1 694 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 DIAPH3Q9NSV4 1193 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 C9orf78Q9NZ63 289 aaPredicted RBP19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 TTC22Q5TAA0 569 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 PLEKHM2Q8IWE5 1019 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 NEO1Q92859 1461 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 KIAA2012Q0VF49 1180 aa19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 SYAP1Q96A49 352 aaPredicted RBP19.67■□□□□ 0.74
PDZRN3-201ENST00000263666 G2E3Q7L622 706 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 SYNMO15061 1565 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 NSD2O96028 1365 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 LRRCC1Q9C099 1032 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 IL16Q14005 1332 aa19.66■□□□□ 0.74
PDZRN3-201ENST00000263666 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
PDZRN3-201ENST00000263666 CLTCL1P53675 1640 aa19.65■□□□□ 0.74
PDZRN3-201ENST00000263666 RPAP2Q8IXW5 612 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms