RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 NFE2L2Q16236 605 aa20.56■□□□□ 0.88
VPS26A-201ENST00000263559 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
VPS26A-201ENST00000263559 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
VPS26A-201ENST00000263559 FLT4P35916 1363 aa20.55■□□□□ 0.88
VPS26A-201ENST00000263559 AMPHP49418 695 aa20.55■□□□□ 0.88
VPS26A-201ENST00000263559 CRBNQ96SW2 442 aa20.55■□□□□ 0.88
VPS26A-201ENST00000263559 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
VPS26A-201ENST00000263559 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
VPS26A-201ENST00000263559 AEBP1Q8IUX7 1158 aa20.54■□□□□ 0.88
VPS26A-201ENST00000263559 IL16Q14005 1332 aa20.54■□□□□ 0.88
VPS26A-201ENST00000263559 RGPD1P0DJD0 1748 aa20.54■□□□□ 0.88
VPS26A-201ENST00000263559 FOXO3O43524 673 aa20.54■□□□□ 0.88
VPS26A-201ENST00000263559 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
VPS26A-201ENST00000263559 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
VPS26A-201ENST00000263559 C1orf167Q5SNV9 1468 aa20.53■□□□□ 0.88
VPS26A-201ENST00000263559 STRCQ7RTU9 1775 aa20.53■□□□□ 0.88
VPS26A-201ENST00000263559 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.88
VPS26A-201ENST00000263559 RARSP54136 660 aaKnown RBP20.5■□□□□ 0.87
VPS26A-201ENST00000263559 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
VPS26A-201ENST00000263559 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
VPS26A-201ENST00000263559 ATF3P18847 181 aa20.49■□□□□ 0.87
VPS26A-201ENST00000263559 HOXC9P31274 260 aa20.49■□□□□ 0.87
VPS26A-201ENST00000263559 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
VPS26A-201ENST00000263559 EXOSC9Q06265 439 aaKnown RBP20.48■□□□□ 0.87
VPS26A-201ENST00000263559 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
VPS26A-201ENST00000263559 ARHGEF10O15013 1369 aa20.48■□□□□ 0.87
VPS26A-201ENST00000263559 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
VPS26A-201ENST00000263559 TSHZ2Q9NRE2 1034 aa20.48■□□□□ 0.87
VPS26A-201ENST00000263559 LTN1O94822 1766 aa20.47■□□□□ 0.87
VPS26A-201ENST00000263559 MST1RQ04912 1400 aa20.47■□□□□ 0.87
VPS26A-201ENST00000263559 KRT28Q7Z3Y7 464 aa20.46■□□□□ 0.87
VPS26A-201ENST00000263559 DCCP43146 1447 aa20.46■□□□□ 0.87
VPS26A-201ENST00000263559 EYA1Q99502 592 aa20.46■□□□□ 0.87
VPS26A-201ENST00000263559 TRPM3Q9HCF6 1732 aaPredicted RBP20.45■□□□□ 0.86
VPS26A-201ENST00000263559 NFAT5O94916 1531 aa20.45■□□□□ 0.86
VPS26A-201ENST00000263559 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
VPS26A-201ENST00000263559 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
VPS26A-201ENST00000263559 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
VPS26A-201ENST00000263559 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
VPS26A-201ENST00000263559 XIRP1Q702N8 1843 aaKnown RBP20.44■□□□□ 0.86
VPS26A-201ENST00000263559 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
VPS26A-201ENST00000263559 BCL2L13Q9BXK5 485 aa20.44■□□□□ 0.86
VPS26A-201ENST00000263559 CALD1Q05682 793 aaKnown RBP20.43■□□□□ 0.86
VPS26A-201ENST00000263559 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
VPS26A-201ENST00000263559 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
VPS26A-201ENST00000263559 KDRP35968 1356 aa20.43■□□□□ 0.86
VPS26A-201ENST00000263559 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
VPS26A-201ENST00000263559 LMOD2Q6P5Q4 547 aa20.42■□□□□ 0.86
VPS26A-201ENST00000263559 CADPS2Q86UW7 1296 aa20.42■□□□□ 0.86
VPS26A-201ENST00000263559 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
VPS26A-201ENST00000263559 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
VPS26A-201ENST00000263559 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
VPS26A-201ENST00000263559 IP6K1Q92551 441 aa20.41■□□□□ 0.86
VPS26A-201ENST00000263559 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
VPS26A-201ENST00000263559 MSH6P52701 1360 aa20.41■□□□□ 0.86
VPS26A-201ENST00000263559 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
VPS26A-201ENST00000263559 GCP02774 474 aa20.4■□□□□ 0.86
VPS26A-201ENST00000263559 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
VPS26A-201ENST00000263559 GNAI1P63096 354 aa20.4■□□□□ 0.86
VPS26A-201ENST00000263559 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
VPS26A-201ENST00000263559 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.85
VPS26A-201ENST00000263559 SLIT3O75094 1523 aa20.39■□□□□ 0.85
VPS26A-201ENST00000263559 PANK1Q8TE04 598 aa20.38■□□□□ 0.85
VPS26A-201ENST00000263559 ZNF335Q9H4Z2 1342 aaPredicted RBP20.38■□□□□ 0.85
VPS26A-201ENST00000263559 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
VPS26A-201ENST00000263559 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
VPS26A-201ENST00000263559 MTHFSDQ2M296 383 aaKnown RBP20.37■□□□□ 0.85
VPS26A-201ENST00000263559 SSH1Q8WYL5 1049 aa20.37■□□□□ 0.85
VPS26A-201ENST00000263559 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
VPS26A-201ENST00000263559 USP19O94966 1318 aa20.37■□□□□ 0.85
VPS26A-201ENST00000263559 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
VPS26A-201ENST00000263559 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
VPS26A-201ENST00000263559 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
VPS26A-201ENST00000263559 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
VPS26A-201ENST00000263559 MCM10Q7L590 875 aa20.35■□□□□ 0.85
VPS26A-201ENST00000263559 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
VPS26A-201ENST00000263559 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
VPS26A-201ENST00000263559 RLBP1P12271 317 aa20.33■□□□□ 0.85
VPS26A-201ENST00000263559 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.84
VPS26A-201ENST00000263559 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.84
VPS26A-201ENST00000263559 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
VPS26A-201ENST00000263559 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
VPS26A-201ENST00000263559 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
VPS26A-201ENST00000263559 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
VPS26A-201ENST00000263559 VAMP4O75379 141 aa20.31■□□□□ 0.84
VPS26A-201ENST00000263559 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
VPS26A-201ENST00000263559 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
VPS26A-201ENST00000263559 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
VPS26A-201ENST00000263559 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
VPS26A-201ENST00000263559 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
VPS26A-201ENST00000263559 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
VPS26A-201ENST00000263559 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
VPS26A-201ENST00000263559 C8orf58Q8NAV2 365 aa20.29■□□□□ 0.84
VPS26A-201ENST00000263559 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
VPS26A-201ENST00000263559 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
VPS26A-201ENST00000263559 CRB1P82279 1406 aa20.29■□□□□ 0.84
VPS26A-201ENST00000263559 CHL1O00533 1208 aa20.29■□□□□ 0.84
VPS26A-201ENST00000263559 BRINP3Q76B58 766 aa20.29■□□□□ 0.84
VPS26A-201ENST00000263559 PXDNQ92626 1479 aa20.28■□□□□ 0.84
VPS26A-201ENST00000263559 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms