RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 NUDT16Q96DE0 195 aaKnown RBP20.09■□□□□ 0.81
CROCCP3-201ENST00000263511 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
CROCCP3-201ENST00000263511 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.81
CROCCP3-201ENST00000263511 PDILTQ8N807 584 aa20.08■□□□□ 0.81
CROCCP3-201ENST00000263511 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
CROCCP3-201ENST00000263511 STK38Q15208 465 aa20.08■□□□□ 0.81
CROCCP3-201ENST00000263511 JMYQ8N9B5 988 aa20.08■□□□□ 0.8
CROCCP3-201ENST00000263511 ZNF428Q96B54 188 aa20.08■□□□□ 0.8
CROCCP3-201ENST00000263511 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.8
CROCCP3-201ENST00000263511 TMEM132AQ24JP5 1023 aa20.07■□□□□ 0.8
CROCCP3-201ENST00000263511 CDR1P51861 262 aa20.07■□□□□ 0.8
CROCCP3-201ENST00000263511 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
CROCCP3-201ENST00000263511 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
CROCCP3-201ENST00000263511 RUFY1Q96T51 708 aa20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 KRT18P05783 430 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 CCDC173Q0VFZ6 552 aa20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 ZFYVE27Q5T4F4 411 aa20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-201ENST00000263511 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 WWC2Q6AWC2 1192 aa20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 FILIP1LQ4L180 1135 aa20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 ARGLU1Q9NWB6 273 aaPredicted RBP20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 AACSQ86V21 672 aa20.05■□□□□ 0.8
CROCCP3-201ENST00000263511 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 MAGEC2Q9UBF1 373 aaPredicted RBP20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 CCDC69A6NI79 296 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 GNAT3A8MTJ3 354 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
CROCCP3-201ENST00000263511 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■■■■■ 149.1
CROCCP3-201ENST00000263511 STARD3NLO95772 234 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 ACBD3Q9H3P7 528 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 TEX35Q5T0J7 233 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 MRE11P49959 708 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 TRIM5Q9C035 493 aa20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 NASPP49321 788 aaPredicted RBP20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 RBM5P52756 815 aaKnown RBP eCLIP20.03■□□□□ 0.8
CROCCP3-201ENST00000263511 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
CROCCP3-201ENST00000263511 FIBPO43427 364 aa20.02■□□□□ 0.8
CROCCP3-201ENST00000263511 AK7Q96M32 723 aa20.02■□□□□ 0.8
CROCCP3-201ENST00000263511 CCDC39Q9UFE4 941 aa20.02■□□□□ 0.8
CROCCP3-201ENST00000263511 CTNNA3Q9UI47 895 aa20.02■□□□□ 0.8
CROCCP3-201ENST00000263511 SOGA3Q5TF21 947 aa20.02■□□□□ 0.79
CROCCP3-201ENST00000263511 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 IGHMBP2P38935 993 aaKnown RBP20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 RDXP35241 583 aaKnown RBP20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 CAVIN1Q6NZI2 390 aaKnown RBP20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 RPAP2Q8IXW5 612 aaPredicted RBP20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 SMARCE1Q969G3 411 aa20.01■□□□□ 0.79
CROCCP3-201ENST00000263511 HSP90AB2PQ58FF8 381 aa20■□□□□ 0.79
CROCCP3-201ENST00000263511 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
CROCCP3-201ENST00000263511 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
CROCCP3-201ENST00000263511 SMC2O95347 1197 aa20■□□□□ 0.79
CROCCP3-201ENST00000263511 CHD1LQ86WJ1 897 aa20■□□□□ 0.79
CROCCP3-201ENST00000263511 FMNL2Q96PY5 1086 aa20■□□□□ 0.79
CROCCP3-201ENST00000263511 TRAK2O60296 914 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 STK11IPQ8N1F8 1099 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 CCDC141Q6ZP82 1450 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 STK3Q13188 491 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 NUP133Q8WUM0 1156 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 RAI14Q9P0K7 980 aa19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
CROCCP3-201ENST00000263511 TMPOP42166 694 aaKnown RBP19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 CAGE1Q8TC20 777 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 TDO2P48775 406 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 BLOC1S2Q6QNY1 142 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 EPRSP07814 1512 aaKnown RBP19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 CDKL5O76039 1030 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 TSPY26PQ9H489 355 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 BICDL1Q6ZP65 573 aa19.98■□□□□ 0.79
CROCCP3-201ENST00000263511 SYCP1Q15431 976 aa19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 UBAC1Q9BSL1 405 aa19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 ZSCAN29Q8IWY8 852 aaPredicted RBP19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 NOL7Q9UMY1 257 aaKnown RBP19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 HSP90B2PQ58FF3 399 aa19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 LRP2BPQ9P2M1 347 aa19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.97■□□□□ 0.79
CROCCP3-201ENST00000263511 ZNF652Q9Y2D9 606 aa19.96■□□□□ 0.79
CROCCP3-201ENST00000263511 KRT32Q14532 448 aa19.96■□□□□ 0.79
CROCCP3-201ENST00000263511 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
CROCCP3-201ENST00000263511 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
CROCCP3-201ENST00000263511 STIM1Q13586 685 aa19.95■□□□□ 0.78
CROCCP3-201ENST00000263511 ZNF771Q7L3S4 317 aaPredicted RBP19.95■□□□□ 0.78
CROCCP3-201ENST00000263511 IL1RAPL2Q9NP60 686 aa19.95■□□□□ 0.78
CROCCP3-201ENST00000263511 TMOD3Q9NYL9 352 aa19.95■□□□□ 0.78
CROCCP3-201ENST00000263511 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms