RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 RAPGEF6Q8TEU7 1601 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
TCF3-201ENST00000262965 MTERF4Q7Z6M4 381 aaKnown RBP16.23■□□□□ 0.19
TCF3-201ENST00000262965 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 PDCP20941 246 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 SSFA2P28290 1259 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 FERMT3Q86UX7 667 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 ATP10BO94823 1461 aa16.23■□□□□ 0.19
TCF3-201ENST00000262965 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
TCF3-201ENST00000262965 ARGLU1Q9NWB6 273 aaPredicted RBP16.22■□□□□ 0.19
TCF3-201ENST00000262965 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
TCF3-201ENST00000262965 ZSCAN30Q86W11 494 aa16.22■□□□□ 0.19
TCF3-201ENST00000262965 ANKRD20A12PQ8NF67 263 aa16.22■□□□□ 0.19
TCF3-201ENST00000262965 CWC27Q6UX04 472 aaKnown RBP16.21■□□□□ 0.19
TCF3-201ENST00000262965 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
TCF3-201ENST00000262965 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
TCF3-201ENST00000262965 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
TCF3-201ENST00000262965 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.19
TCF3-201ENST00000262965 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
TCF3-201ENST00000262965 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
TCF3-201ENST00000262965 EVA1CP58658 441 aa16.21■□□□□ 0.18
TCF3-201ENST00000262965 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.18
TCF3-201ENST00000262965 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.18
TCF3-201ENST00000262965 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
TCF3-201ENST00000262965 CCDC192P0DO97 292 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
TCF3-201ENST00000262965 NAT10Q9H0A0 1025 aaKnown RBP16.2■□□□□ 0.18
TCF3-201ENST00000262965 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
TCF3-201ENST00000262965 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
TCF3-201ENST00000262965 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
TCF3-201ENST00000262965 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 G3V3G9 751 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 FYB1O15117 783 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 CCDC70Q6NSX1 233 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
TCF3-201ENST00000262965 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
TCF3-201ENST00000262965 KRT85P78386 507 aa16.19■□□□□ 0.18
TCF3-201ENST00000262965 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
TCF3-201ENST00000262965 STK38Q15208 465 aa16.18■□□□□ 0.18
TCF3-201ENST00000262965 GDPD2Q9HCC8 539 aa16.18■□□□□ 0.18
TCF3-201ENST00000262965 TRIM27P14373 513 aa16.18■□□□□ 0.18
TCF3-201ENST00000262965 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
TCF3-201ENST00000262965 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
TCF3-201ENST00000262965 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
TCF3-201ENST00000262965 ME1P48163 572 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 SKIDA1Q1XH10 827 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
TCF3-201ENST00000262965 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
TCF3-201ENST00000262965 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
TCF3-201ENST00000262965 SLC52A1Q9NWF4 448 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 NUP160Q12769 1436 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 ERICH2A1L162 156 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 FAM177BA6PVY3 158 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 HSP90B2PQ58FF3 399 aa16.17■□□□□ 0.18
TCF3-201ENST00000262965 MCM10Q7L590 875 aa16.16■□□□□ 0.18
TCF3-201ENST00000262965 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
TCF3-201ENST00000262965 CCDC112Q8NEF3 446 aa16.16■□□□□ 0.18
TCF3-201ENST00000262965 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
TCF3-201ENST00000262965 FCHSD2O94868 740 aa16.15■□□□□ 0.18
TCF3-201ENST00000262965 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
TCF3-201ENST00000262965 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
TCF3-201ENST00000262965 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
TCF3-201ENST00000262965 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
TCF3-201ENST00000262965 CAMK4Q16566 473 aa16.15■□□□□ 0.18
TCF3-201ENST00000262965 NKTRP30414 1462 aaKnown RBP16.14■□□□□ 0.17
TCF3-201ENST00000262965 F6X3S4 739 aa16.14■□□□□ 0.17
TCF3-201ENST00000262965 RRP12Q5JTH9 1297 aaKnown RBP16.14■□□□□ 0.17
TCF3-201ENST00000262965 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
TCF3-201ENST00000262965 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
TCF3-201ENST00000262965 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
TCF3-201ENST00000262965 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
TCF3-201ENST00000262965 AACSQ86V21 672 aa16.13■□□□□ 0.17
TCF3-201ENST00000262965 FANCAO15360 1455 aa16.13■□□□□ 0.17
TCF3-201ENST00000262965 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
TCF3-201ENST00000262965 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
TCF3-201ENST00000262965 NUP62CLQ9H1M0 184 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 PBRM1Q86U86 1689 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 SETQ01105 290 aaPredicted RBP16.12■□□□□ 0.17
TCF3-201ENST00000262965 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
TCF3-201ENST00000262965 SERPINC1P01008 464 aa16.11■□□□□ 0.17
TCF3-201ENST00000262965 CASTP20810 708 aaKnown RBP16.11■□□□□ 0.17
TCF3-201ENST00000262965 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
TCF3-201ENST00000262965 MYL6BP14649 208 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms