RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
SIM1-201ENST00000262901 NME9Q86XW9 330 aa12.05□□□□□ -0.48
SIM1-201ENST00000262901 FAM43AQ8N2R8 423 aa12.05□□□□□ -0.48
SIM1-201ENST00000262901 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
SIM1-201ENST00000262901 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
SIM1-201ENST00000262901 MED14O60244 1454 aa12.05□□□□□ -0.48
SIM1-201ENST00000262901 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 TTC21AQ8NDW8 1320 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
SIM1-201ENST00000262901 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 APBB1O00213 710 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
SIM1-201ENST00000262901 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 FYB1O15117 783 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 PARD3Q8TEW0 1356 aa12.04□□□□□ -0.48
SIM1-201ENST00000262901 ARHGEF28Q8N1W1 1705 aaKnown RBP12.04□□□□□ -0.48
SIM1-201ENST00000262901 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
SIM1-201ENST00000262901 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
SIM1-201ENST00000262901 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
SIM1-201ENST00000262901 CPS1P31327 1500 aa12.03□□□□□ -0.48
SIM1-201ENST00000262901 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
SIM1-201ENST00000262901 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
SIM1-201ENST00000262901 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
SIM1-201ENST00000262901 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
SIM1-201ENST00000262901 ATP7BP35670 1465 aa12.03□□□□□ -0.48
SIM1-201ENST00000262901 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.48
SIM1-201ENST00000262901 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.49
SIM1-201ENST00000262901 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
SIM1-201ENST00000262901 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
SIM1-201ENST00000262901 APAF1O14727 1248 aa12.01□□□□□ -0.49
SIM1-201ENST00000262901 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
SIM1-201ENST00000262901 ORAI2Q96SN7 254 aa12.01□□□□□ -0.49
SIM1-201ENST00000262901 NKTRP30414 1462 aaKnown RBP12□□□□□ -0.49
SIM1-201ENST00000262901 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
SIM1-201ENST00000262901 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
SIM1-201ENST00000262901 WWC1Q8IX03 1113 aa12□□□□□ -0.49
SIM1-201ENST00000262901 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
SIM1-201ENST00000262901 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
SIM1-201ENST00000262901 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
SIM1-201ENST00000262901 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
SIM1-201ENST00000262901 HSCBQ8IWL3 235 aa11.99□□□□□ -0.49
SIM1-201ENST00000262901 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
SIM1-201ENST00000262901 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
SIM1-201ENST00000262901 IGSF3O75054 1194 aa11.98□□□□□ -0.49
SIM1-201ENST00000262901 MS4A1P11836 297 aa11.98□□□□□ -0.49
SIM1-201ENST00000262901 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
SIM1-201ENST00000262901 COG6Q9Y2V7 657 aa11.98□□□□□ -0.49
SIM1-201ENST00000262901 SMC4Q9NTJ3 1288 aa11.97□□□□□ -0.49
SIM1-201ENST00000262901 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
SIM1-201ENST00000262901 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
SIM1-201ENST00000262901 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
SIM1-201ENST00000262901 TOM1O60784 492 aa11.97□□□□□ -0.49
SIM1-201ENST00000262901 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
SIM1-201ENST00000262901 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
SIM1-201ENST00000262901 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
SIM1-201ENST00000262901 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.5
SIM1-201ENST00000262901 TMEM51Q9NW97 253 aa11.96□□□□□ -0.5
SIM1-201ENST00000262901 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.5
SIM1-201ENST00000262901 USP6P35125 1406 aa11.95□□□□□ -0.5
SIM1-201ENST00000262901 PTMAP06454 111 aaKnown RBP11.95□□□□□ -0.5
SIM1-201ENST00000262901 PIP4K2BP78356 416 aa11.95□□□□□ -0.5
SIM1-201ENST00000262901 PLCB2Q00722 1185 aa11.95□□□□□ -0.5
SIM1-201ENST00000262901 RRAGDQ9NQL2 400 aaPredicted RBP11.95□□□□□ -0.5
SIM1-201ENST00000262901 KNDC1Q76NI1 1749 aa11.95□□□□□ -0.5
SIM1-201ENST00000262901 KCNA4P22459 653 aa11.95□□□□□ -0.5
SIM1-201ENST00000262901 EMILIN1Q9Y6C2 1016 aa11.94□□□□□ -0.5
SIM1-201ENST00000262901 ELL2O00472 640 aaPredicted RBP11.94□□□□□ -0.5
SIM1-201ENST00000262901 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
SIM1-201ENST00000262901 A0A0G2JS52 829 aa11.94□□□□□ -0.5
SIM1-201ENST00000262901 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
SIM1-201ENST00000262901 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
SIM1-201ENST00000262901 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
SIM1-201ENST00000262901 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
SIM1-201ENST00000262901 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
SIM1-201ENST00000262901 CPSF1Q10570 1443 aaKnown RBP11.92□□□□□ -0.5
SIM1-201ENST00000262901 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
SIM1-201ENST00000262901 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
SIM1-201ENST00000262901 CENPQQ7L2Z9 268 aaPredicted RBP11.92□□□□□ -0.5
SIM1-201ENST00000262901 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
SIM1-201ENST00000262901 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
SIM1-201ENST00000262901 DCCP43146 1447 aa11.91□□□□□ -0.5
SIM1-201ENST00000262901 FBLN1P23142 703 aa11.91□□□□□ -0.5
SIM1-201ENST00000262901 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
SIM1-201ENST00000262901 C1orf167Q5SNV9 1468 aa11.91□□□□□ -0.5
SIM1-201ENST00000262901 CDC42BPGQ6DT37 1551 aa11.91□□□□□ -0.5
SIM1-201ENST00000262901 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
SIM1-201ENST00000262901 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
SIM1-201ENST00000262901 SETD1AO15047 1707 aaKnown RBP11.9□□□□□ -0.5
SIM1-201ENST00000262901 HMOX1P09601 288 aa11.9□□□□□ -0.5
SIM1-201ENST00000262901 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
SIM1-201ENST00000262901 SMG6Q86US8 1419 aaKnown RBP11.9□□□□□ -0.5
SIM1-201ENST00000262901 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
SIM1-201ENST00000262901 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
SIM1-201ENST00000262901 GSE1Q14687 1217 aa11.89□□□□□ -0.51
SIM1-201ENST00000262901 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
SIM1-201ENST00000262901 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
SIM1-201ENST00000262901 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
SIM1-201ENST00000262901 EVA1CP58658 441 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms