RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 MPHOSPH9Q99550 1183 aa7.54□□□□□ -1.2
ITCH-201ENST00000262650 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
ITCH-201ENST00000262650 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 LAS1LQ9Y4W2 734 aaKnown RBP7.53□□□□□ -1.2
ITCH-201ENST00000262650 LMOD2Q6P5Q4 547 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 ORAI2Q96SN7 254 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 LRP5O75197 1615 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 THSD7AQ9UPZ6 1657 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 ITGAEP38570 1179 aa7.53□□□□□ -1.2
ITCH-201ENST00000262650 TULP4Q9NRJ4 1543 aa7.52□□□□□ -1.21
ITCH-201ENST00000262650 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
ITCH-201ENST00000262650 TNS3Q68CZ2 1445 aa7.52□□□□□ -1.21
ITCH-201ENST00000262650 QTRT2Q9H974 415 aaKnown RBP7.52□□□□□ -1.21
ITCH-201ENST00000262650 TRPC5Q9UL62 973 aaPredicted RBP7.52□□□□□ -1.21
ITCH-201ENST00000262650 PLEKHH1Q9ULM0 1364 aa7.52□□□□□ -1.21
ITCH-201ENST00000262650 PHRF1Q9P1Y6 1649 aaKnown RBP7.52□□□□□ -1.21
ITCH-201ENST00000262650 RGPD1P0DJD0 1748 aa7.51□□□□□ -1.21
ITCH-201ENST00000262650 ONECUT3O60422 494 aaPredicted RBP7.51□□□□□ -1.21
ITCH-201ENST00000262650 DDX17Q92841 729 aaKnown RBP7.51□□□□□ -1.21
ITCH-201ENST00000262650 NGLY1Q96IV0 654 aa7.51□□□□□ -1.21
ITCH-201ENST00000262650 BRD1O95696 1058 aa7.5□□□□□ -1.21
ITCH-201ENST00000262650 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
ITCH-201ENST00000262650 FAM193AP78312 1265 aa7.5□□□□□ -1.21
ITCH-201ENST00000262650 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
ITCH-201ENST00000262650 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
ITCH-201ENST00000262650 EIF3AQ14152 1382 aaKnown RBP7.5□□□□□ -1.21
ITCH-201ENST00000262650 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
ITCH-201ENST00000262650 TRIM52Q96A61 297 aa7.5□□□□□ -1.21
ITCH-201ENST00000262650 TNS1Q9HBL0 1735 aaKnown RBP7.5□□□□□ -1.21
ITCH-201ENST00000262650 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
ITCH-201ENST00000262650 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
ITCH-201ENST00000262650 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
ITCH-201ENST00000262650 ARHGEF10O15013 1369 aa7.49□□□□□ -1.21
ITCH-201ENST00000262650 MIER1Q8N108 512 aa7.48□□□□□ -1.21
ITCH-201ENST00000262650 C8orf37Q96NL8 207 aa7.48□□□□□ -1.21
ITCH-201ENST00000262650 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ITCH-201ENST00000262650 RGPD3A6NKT7 1758 aaPredicted RBP7.48□□□□□ -1.21
ITCH-201ENST00000262650 RGPD4Q7Z3J3 1758 aa7.48□□□□□ -1.21
ITCH-201ENST00000262650 LMO7Q8WWI1 1683 aa7.48□□□□□ -1.21
ITCH-201ENST00000262650 USP54Q70EL1 1684 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 WNK3Q9BYP7 1800 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 ATP7BP35670 1465 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
ITCH-201ENST00000262650 PHF14O94880 888 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 WAPLQ7Z5K2 1190 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 UNC5CLQ8IV45 518 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
ITCH-201ENST00000262650 SLC24A3Q9HC58 644 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 RREB1Q92766 1687 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
ITCH-201ENST00000262650 DISP2A7MBM2 1401 aa7.46□□□□□ -1.21
ITCH-201ENST00000262650 BLMP54132 1417 aaPredicted RBP7.46□□□□□ -1.21
ITCH-201ENST00000262650 VPS72Q15906 364 aa7.46□□□□□ -1.21
ITCH-201ENST00000262650 ESCO1Q5FWF5 840 aa7.46□□□□□ -1.21
ITCH-201ENST00000262650 SPTY2D1Q68D10 685 aaPredicted RBP7.46□□□□□ -1.22
ITCH-201ENST00000262650 PSME1Q06323 249 aa7.46□□□□□ -1.22
ITCH-201ENST00000262650 NRKQ7Z2Y5 1582 aa7.45□□□□□ -1.22
ITCH-201ENST00000262650 MKRN3Q13064 507 aaKnown RBP7.45□□□□□ -1.22
ITCH-201ENST00000262650 NOL8Q76FK4 1167 aaKnown RBP7.45□□□□□ -1.22
ITCH-201ENST00000262650 KRT28Q7Z3Y7 464 aa7.45□□□□□ -1.22
ITCH-201ENST00000262650 FAM9BQ8IZU0 186 aa7.45□□□□□ -1.22
ITCH-201ENST00000262650 PHF8Q9UPP1 1060 aa7.45□□□□□ -1.22
ITCH-201ENST00000262650 PARP4Q9UKK3 1724 aaKnown RBP7.45□□□□□ -1.22
ITCH-201ENST00000262650 POLR3AO14802 1390 aaPredicted RBP7.45□□□□□ -1.22
ITCH-201ENST00000262650 BRD4O60885 1362 aaPredicted RBP7.45□□□□□ -1.22
ITCH-201ENST00000262650 AKAP12Q02952 1782 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 FOXO3O43524 673 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 ADAMTS2O95450 1211 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 TMEM132EQ6IEE7 984 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 PEAK1Q9H792 1746 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 COL18A1P39060 1754 aa7.44□□□□□ -1.22
ITCH-201ENST00000262650 PATL2C9JE40 543 aaKnown RBP7.43□□□□□ -1.22
ITCH-201ENST00000262650 RGL2O15211 777 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 QRICH2Q9H0J4 1663 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 CLGNO14967 610 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 CANXP27824 592 aaKnown RBP7.43□□□□□ -1.22
ITCH-201ENST00000262650 IRF5Q13568 498 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
ITCH-201ENST00000262650 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
ITCH-201ENST00000262650 PRR36Q9H6K5 1346 aa7.43□□□□□ -1.22
ITCH-201ENST00000262650 TRPM1Q7Z4N2 1603 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 ABCC6O95255 1503 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 ECM2O94769 699 aaPredicted RBP7.42□□□□□ -1.22
ITCH-201ENST00000262650 SPATA32Q96LK8 384 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 SBF2Q86WG5 1849 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 SLIT3O75094 1523 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 PRAM1Q96QH2 718 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 NUP188Q5SRE5 1749 aa7.42□□□□□ -1.22
ITCH-201ENST00000262650 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
ITCH-201ENST00000262650 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.226e-7■□□□□ 11.1
ITCH-201ENST00000262650 STK26Q9P289 416 aa7.41□□□□□ -1.22
ITCH-201ENST00000262650 WASLO00401 505 aaPredicted RBP7.41□□□□□ -1.22
ITCH-201ENST00000262650 MMP14P50281 582 aa7.41□□□□□ -1.22
ITCH-201ENST00000262650 CPDO75976 1380 aa7.41□□□□□ -1.22
ITCH-201ENST00000262650 NME8Q8N427 588 aa7.4□□□□□ -1.22
ITCH-201ENST00000262650 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms