RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 AK9Q5TCS8 1911 aa21.69■■□□□ 1.06
TRAM1-201ENST00000262213 APBB1O00213 710 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 SKOR2Q2VWA4 1001 aaPredicted RBP21.68■■□□□ 1.06
TRAM1-201ENST00000262213 POLKQ9UBT6 870 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 HECW2Q9P2P5 1572 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 NCLP19338 710 aaKnown RBP21.68■■□□□ 1.06
TRAM1-201ENST00000262213 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 MBIPQ9NS73 344 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 CD163L1Q9NR16 1453 aa21.68■■□□□ 1.06
TRAM1-201ENST00000262213 DDX49Q9Y6V7 483 aaKnown RBP21.67■■□□□ 1.06
TRAM1-201ENST00000262213 CDC45O75419 566 aa21.67■■□□□ 1.06
TRAM1-201ENST00000262213 EMILIN1Q9Y6C2 1016 aa21.67■■□□□ 1.06
TRAM1-201ENST00000262213 ISY1Q9ULR0 285 aaKnown RBP21.66■■□□□ 1.06
TRAM1-201ENST00000262213 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
TRAM1-201ENST00000262213 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
TRAM1-201ENST00000262213 MLH3Q9UHC1 1453 aa21.66■■□□□ 1.06
TRAM1-201ENST00000262213 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
TRAM1-201ENST00000262213 GOLGA6L22H0YM25 854 aa21.65■■□□□ 1.06
TRAM1-201ENST00000262213 GSPT1P15170 499 aaKnown RBP21.65■■□□□ 1.06
TRAM1-201ENST00000262213 DCTN1Q14203 1278 aa21.65■■□□□ 1.06
TRAM1-201ENST00000262213 C8orf58Q8NAV2 365 aa21.65■■□□□ 1.06
TRAM1-201ENST00000262213 MED14O60244 1454 aa21.64■■□□□ 1.05
TRAM1-201ENST00000262213 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.05
TRAM1-201ENST00000262213 GNAI1P63096 354 aa21.64■■□□□ 1.05
TRAM1-201ENST00000262213 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
TRAM1-201ENST00000262213 MCTP1Q6DN14 999 aa21.63■■□□□ 1.05
TRAM1-201ENST00000262213 FAM135BQ49AJ0 1406 aa21.63■■□□□ 1.05
TRAM1-201ENST00000262213 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
TRAM1-201ENST00000262213 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
TRAM1-201ENST00000262213 ZRANB1Q9UGI0 708 aa21.63■■□□□ 1.05
TRAM1-201ENST00000262213 PTPRMP28827 1452 aa21.63■■□□□ 1.05
TRAM1-201ENST00000262213 NASPP49321 788 aaPredicted RBP21.62■■□□□ 1.05
TRAM1-201ENST00000262213 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
TRAM1-201ENST00000262213 PLEKHM2Q8IWE5 1019 aa21.61■■□□□ 1.05
TRAM1-201ENST00000262213 ARHGAP45Q92619 1136 aa21.61■■□□□ 1.05
TRAM1-201ENST00000262213 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
TRAM1-201ENST00000262213 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
TRAM1-201ENST00000262213 RICTORQ6R327 1708 aa21.61■■□□□ 1.05
TRAM1-201ENST00000262213 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
TRAM1-201ENST00000262213 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
TRAM1-201ENST00000262213 ABCC4O15439 1325 aa21.6■■□□□ 1.05
TRAM1-201ENST00000262213 BRPF1P55201 1214 aaPredicted RBP21.6■■□□□ 1.05
TRAM1-201ENST00000262213 PIK3C2BO00750 1634 aa21.6■■□□□ 1.05
TRAM1-201ENST00000262213 MYO5BQ9ULV0 1848 aa21.6■■□□□ 1.05
TRAM1-201ENST00000262213 ANKRD26Q9UPS8 1709 aa21.6■■□□□ 1.05
TRAM1-201ENST00000262213 PTMSP20962 102 aa21.59■■□□□ 1.05
TRAM1-201ENST00000262213 IFT57Q9NWB7 429 aa21.59■■□□□ 1.05
TRAM1-201ENST00000262213 PTCH1Q13635 1447 aa21.59■■□□□ 1.05
TRAM1-201ENST00000262213 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
TRAM1-201ENST00000262213 PKP1Q13835 747 aa21.59■■□□□ 1.05
TRAM1-201ENST00000262213 FBXO31Q5XUX0 539 aaPredicted RBP21.59■■□□□ 1.05
TRAM1-201ENST00000262213 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
TRAM1-201ENST00000262213 NME9Q86XW9 330 aa21.59■■□□□ 1.05
TRAM1-201ENST00000262213 ZFYVE9O95405 1425 aa21.58■■□□□ 1.05
TRAM1-201ENST00000262213 CAVIN1Q6NZI2 390 aaKnown RBP21.58■■□□□ 1.05
TRAM1-201ENST00000262213 FAM69CQ0P6D2 419 aa21.58■■□□□ 1.04
TRAM1-201ENST00000262213 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.04
TRAM1-201ENST00000262213 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.04
TRAM1-201ENST00000262213 KRT24Q2M2I5 525 aa21.57■■□□□ 1.04
TRAM1-201ENST00000262213 API5Q9BZZ5 524 aaKnown RBP21.57■■□□□ 1.04
TRAM1-201ENST00000262213 SLC52A1Q9NWF4 448 aa21.57■■□□□ 1.04
TRAM1-201ENST00000262213 TTC22Q5TAA0 569 aa21.56■■□□□ 1.04
TRAM1-201ENST00000262213 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
TRAM1-201ENST00000262213 RABEP1Q15276 862 aa21.55■■□□□ 1.04
TRAM1-201ENST00000262213 KLHL40Q2TBA0 621 aa21.55■■□□□ 1.04
TRAM1-201ENST00000262213 FOXD4L5Q5VV16 416 aaPredicted RBP21.55■■□□□ 1.04
TRAM1-201ENST00000262213 FOXD4L4Q8WXT5 416 aaPredicted RBP21.55■■□□□ 1.04
TRAM1-201ENST00000262213 CHAMP1Q96JM3 812 aa21.55■■□□□ 1.04
TRAM1-201ENST00000262213 CCDC173Q0VFZ6 552 aa21.55■■□□□ 1.04
TRAM1-201ENST00000262213 IL13P35225 146 aa21.54■■□□□ 1.04
TRAM1-201ENST00000262213 KIF20BQ96Q89 1820 aa21.54■■□□□ 1.04
TRAM1-201ENST00000262213 ZNF853P0CG23 659 aa21.54■■□□□ 1.04
TRAM1-201ENST00000262213 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
TRAM1-201ENST00000262213 MAP2P11137 1827 aaKnown RBP21.54■■□□□ 1.04
TRAM1-201ENST00000262213 ZGPATQ8N5A5 531 aaKnown RBP21.53■■□□□ 1.04
TRAM1-201ENST00000262213 DIP2CQ9Y2E4 1556 aa21.53■■□□□ 1.04
TRAM1-201ENST00000262213 USP26Q9BXU7 913 aa21.53■■□□□ 1.04
TRAM1-201ENST00000262213 DCTPP1Q9H773 170 aa21.53■■□□□ 1.04
TRAM1-201ENST00000262213 GLIPR1L2Q4G1C9 344 aa21.52■■□□□ 1.04
TRAM1-201ENST00000262213 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
TRAM1-201ENST00000262213 NCKAP5LQ9HCH0 1330 aa21.52■■□□□ 1.04
TRAM1-201ENST00000262213 SDSP20132 328 aa21.51■■□□□ 1.03
TRAM1-201ENST00000262213 RBM27Q9P2N5 1060 aaKnown RBP21.51■■□□□ 1.03
TRAM1-201ENST00000262213 PRPF40AO75400 957 aaKnown RBP21.51■■□□□ 1.03
TRAM1-201ENST00000262213 INTS3Q68E01 1043 aaKnown RBP21.51■■□□□ 1.03
TRAM1-201ENST00000262213 KIF13AQ9H1H9 1805 aa21.51■■□□□ 1.03
TRAM1-201ENST00000262213 TSPOAP1O95153 1857 aa21.5■■□□□ 1.03
TRAM1-201ENST00000262213 KIAA1211Q6ZU35 1233 aa21.5■■□□□ 1.03
TRAM1-201ENST00000262213 ARHGEF40Q8TER5 1519 aa21.5■■□□□ 1.03
TRAM1-201ENST00000262213 RRP9O43818 475 aaKnown RBP21.49■■□□□ 1.03
TRAM1-201ENST00000262213 NUCB2P80303 420 aa21.49■■□□□ 1.03
TRAM1-201ENST00000262213 ZSCAN23Q3MJ62 389 aa21.49■■□□□ 1.03
TRAM1-201ENST00000262213 MSNP26038 577 aaKnown RBP21.49■■□□□ 1.03
TRAM1-201ENST00000262213 LMBRD1Q9NUN5 540 aa21.49■■□□□ 1.03
TRAM1-201ENST00000262213 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
TRAM1-201ENST00000262213 PPP1R9BQ96SB3 815 aa21.48■■□□□ 1.03
TRAM1-201ENST00000262213 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
TRAM1-201ENST00000262213 ZSCAN30Q86W11 494 aa21.48■■□□□ 1.03
TRAM1-201ENST00000262213 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
TRAM1-201ENST00000262213 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms