RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 ERICH2A1L162 156 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 ME1P48163 572 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 ERC1Q8IUD2 1116 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 CGNQ9P2M7 1197 aaKnown RBP12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 PANK2Q9BZ23 570 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.35
CSNK1A1-201ENST00000261798 USP25Q9UHP3 1055 aa12.83□□□□□ -0.35
CSNK1A1-201ENST00000261798 ZHX1Q9UKY1 873 aaPredicted RBP12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 DAPK1P53355 1430 aa12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 USP8P40818 1118 aa12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 KIF18AQ8NI77 898 aa12.83□□□□□ -0.36
CSNK1A1-201ENST00000261798 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 MAP3K1Q13233 1512 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 BLOC1S2Q6QNY1 142 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 IGHDP01880 384 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
CSNK1A1-201ENST00000261798 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
CSNK1A1-201ENST00000261798 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
CSNK1A1-201ENST00000261798 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
CSNK1A1-201ENST00000261798 KIAA0754O94854 1291 aa12.81□□□□□ -0.36
CSNK1A1-201ENST00000261798 XBP1P17861 261 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 UVSSAQ2YD98 709 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 PPFIBP1Q86W92 1011 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 FCHSD2O94868 740 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 TNNT1P13805 278 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 JAKMIP1Q96N16 626 aaKnown RBP12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
CSNK1A1-201ENST00000261798 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 STK3Q13188 491 aa12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 SCAND2PQ9GZW5 306 aaPredicted RBP12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 RRP12Q5JTH9 1297 aaKnown RBP12.79□□□□□ -0.36
CSNK1A1-201ENST00000261798 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 HS1BP3Q53T59 392 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 NEMFO60524 1076 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 OFD1O75665 1012 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 ADCY5O95622 1261 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 SKIDA1Q1XH10 827 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
CSNK1A1-201ENST00000261798 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.36
CSNK1A1-201ENST00000261798 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 AQRO60306 1485 aaKnown RBP eCLIP12.77□□□□□ -0.376e-10■■■■□ 22
CSNK1A1-201ENST00000261798 RPRD2Q5VT52 1461 aaKnown RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 KRT32Q14532 448 aa12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 CAMK4Q16566 473 aa12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 ZNHIT6Q9NWK9 470 aaKnown RBP12.77□□□□□ -0.37
CSNK1A1-201ENST00000261798 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 TRIM27P14373 513 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 SART3Q15020 963 aaKnown RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
CSNK1A1-201ENST00000261798 CASTP20810 708 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms