RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 TPM1P09493 284 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
KPNA3-201ENST00000261667 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 ARHGAP5Q13017 1502 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 PKD2Q13563 968 aa12.73□□□□□ -0.37
KPNA3-201ENST00000261667 INO80Q9ULG1 1556 aaPredicted RBP12.72□□□□□ -0.37
KPNA3-201ENST00000261667 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 TSC1Q92574 1164 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 MYRIPQ8NFW9 859 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
KPNA3-201ENST00000261667 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
KPNA3-201ENST00000261667 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
KPNA3-201ENST00000261667 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
KPNA3-201ENST00000261667 K7ELQ4 463 aaPredicted RBP12.71□□□□□ -0.37
KPNA3-201ENST00000261667 MAP2K2P36507 400 aa12.71□□□□□ -0.37
KPNA3-201ENST00000261667 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
KPNA3-201ENST00000261667 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.37
KPNA3-201ENST00000261667 ERLIN1O75477 346 aa12.71□□□□□ -0.38
KPNA3-201ENST00000261667 KIF18AQ8NI77 898 aa12.71□□□□□ -0.38
KPNA3-201ENST00000261667 ZBTB22O15209 634 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 IVLP07476 585 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 KRBA2Q6ZNG9 492 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
KPNA3-201ENST00000261667 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 PES1O00541 588 aaKnown RBP12.69□□□□□ -0.38
KPNA3-201ENST00000261667 ZFYVE16Q7Z3T8 1539 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 IQGAP3Q86VI3 1631 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 ASXL2Q76L83 1435 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 ATP6V1AP38606 617 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 NUP155O75694 1391 aa12.69□□□□□ -0.38
KPNA3-201ENST00000261667 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 PANK1Q8TE04 598 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 KIF15Q9NS87 1388 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 TMCO5BA8MYB1 307 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
KPNA3-201ENST00000261667 REC8O95072 547 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 CCDC192P0DO97 292 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 TMF1P82094 1093 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 PSMD1Q99460 953 aa12.68□□□□□ -0.38
KPNA3-201ENST00000261667 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
KPNA3-201ENST00000261667 TEX14Q8IWB6 1497 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 SSFA2P28290 1259 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 GBP2P32456 591 aaPredicted RBP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 SF3A1Q15459 793 aaKnown RBP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 CREBRFQ8IUR6 639 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 MAP3K4Q9Y6R4 1608 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 LIG1P18858 919 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 STK31Q9BXU1 1019 aa12.67□□□□□ -0.38
KPNA3-201ENST00000261667 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 V9GYY5 206 aaPredicted RBP12.67□□□□□ -0.38
KPNA3-201ENST00000261667 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 HMMRO75330 724 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 RABEP1Q15276 862 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 CCP110O43303 1012 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 ADCY5O95622 1261 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
KPNA3-201ENST00000261667 ZNF397Q8NF99 534 aaPredicted RBP12.66□□□□□ -0.38
KPNA3-201ENST00000261667 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
KPNA3-201ENST00000261667 FIBPO43427 364 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 FOXD1Q16676 465 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 PAXBP1Q9Y5B6 917 aa12.66□□□□□ -0.38
KPNA3-201ENST00000261667 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
KPNA3-201ENST00000261667 CWC22Q9HCG8 908 aaKnown RBP12.65□□□□□ -0.38
KPNA3-201ENST00000261667 PPP2R5AQ15172 486 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 NEBLO76041 1014 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
KPNA3-201ENST00000261667 CAPN2P17655 700 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 GTF3C6Q969F1 213 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 KDM5CP41229 1560 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
KPNA3-201ENST00000261667 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms