RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 UBTFL1P0CB47 393 aaPredicted RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 LARP1BQ659C4 914 aaKnown RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 G3V3G9 751 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 DCAF8Q5TAQ9 597 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 XBP1P17861 261 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 NOLC1Q14978 699 aaKnown RBP eCLIP8.44□□□□□ -1.06
HERC2-201ENST00000261609 C16orf45Q96MC5 204 aaPredicted RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 ZNF830Q96NB3 372 aaPredicted RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 NUP62CLQ9H1M0 184 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 NOB1Q9ULX3 412 aaKnown RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 MAP2K1Q02750 393 aaPredicted RBP8.44□□□□□ -1.06
HERC2-201ENST00000261609 WASHC2CQ9Y4E1 1318 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 CCDC148Q8NFR7 591 aa8.44□□□□□ -1.06
HERC2-201ENST00000261609 SEPT7Q16181 437 aaKnown RBP8.43□□□□□ -1.06
HERC2-201ENST00000261609 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 RSPH14Q9UHP6 348 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 ANKRD1Q15327 319 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 LUC7LQ9NQ29 371 aaKnown RBP8.43□□□□□ -1.06
HERC2-201ENST00000261609 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 PANK2Q9BZ23 570 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 UPF3BQ9BZI7 483 aaKnown RBP8.43□□□□□ -1.06
HERC2-201ENST00000261609 FBXO3Q9UK99 471 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 LUZP1Q86V48 1076 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 SMTNL1A8MU46 457 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 SFPQP23246 707 aaKnown RBP eCLIP8.43□□□□□ -1.06
HERC2-201ENST00000261609 SART3Q15020 963 aaKnown RBP8.43□□□□□ -1.06
HERC2-201ENST00000261609 SMARCA2P51531 1590 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 MCM3P25205 808 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 TDO2P48775 406 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 TSPYL4Q9UJ04 414 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 TEFQ10587 303 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 ME1P48163 572 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 EID1Q9Y6B2 187 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 KIF20AO95235 890 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 BCAR3O75815 825 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 ENOX2Q16206 610 aaKnown RBP8.43□□□□□ -1.06
HERC2-201ENST00000261609 CEP57L1Q8IYX8 460 aa8.43□□□□□ -1.06
HERC2-201ENST00000261609 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
HERC2-201ENST00000261609 STK38Q15208 465 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 CCDC181Q5TID7 509 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 RRAGDQ9NQL2 400 aaPredicted RBP8.42□□□□□ -1.06
HERC2-201ENST00000261609 CFAP45Q9UL16 551 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 NEMFO60524 1076 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
HERC2-201ENST00000261609 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 FEZ1Q99689 392 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 CLGNO14967 610 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 UVSSAQ2YD98 709 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 POTEB2H3BUK9 544 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 TTC5Q8N0Z6 440 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 ZSCAN23Q3MJ62 389 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 KDM4AO75164 1064 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 KRT85P78386 507 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 WIZO95785 1651 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 KIF5CO60282 957 aa8.42□□□□□ -1.06
HERC2-201ENST00000261609 TXLNAP40222 546 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 VPS37DQ86XT2 251 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 HS1BP3Q53T59 392 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 CYP46A1Q9Y6A2 500 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 CUX1P39880 1505 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 EPB41L2O43491 1005 aaKnown RBP8.41□□□□□ -1.06
HERC2-201ENST00000261609 SSFA2P28290 1259 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 STIM1Q13586 685 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
HERC2-201ENST00000261609 KIF4BQ2VIQ3 1234 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 CLIP2Q9UDT6 1046 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 PPP2R1AP30153 589 aa8.41□□□□□ -1.06
HERC2-201ENST00000261609 ERC1Q8IUD2 1116 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 WDR63Q8IWG1 891 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 CHD1LQ86WJ1 897 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 ZSCAN12O43309 604 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 GNAI3P08754 354 aa8.4□□□□□ -1.06
HERC2-201ENST00000261609 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
HERC2-201ENST00000261609 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
HERC2-201ENST00000261609 ANKRD18AQ8IVF6 992 aa8.4□□□□□ -1.07
HERC2-201ENST00000261609 WASHC4Q2M389 1173 aa8.4□□□□□ -1.07
HERC2-201ENST00000261609 USP25Q9UHP3 1055 aa8.4□□□□□ -1.07
HERC2-201ENST00000261609 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.07
HERC2-201ENST00000261609 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 ARHGAP29Q52LW3 1261 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 SURF6O75683 361 aaKnown RBP8.39□□□□□ -1.07
HERC2-201ENST00000261609 TCP11L2Q8N4U5 519 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 CCDC43Q96MW1 224 aaKnown RBP8.39□□□□□ -1.07
HERC2-201ENST00000261609 MCM6Q14566 821 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 A0A1B0GUL7 405 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 FAM177BA6PVY3 158 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 GNAI2P04899 355 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 SKAP1Q86WV1 359 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 SMARCC1Q92922 1105 aaPredicted RBP8.39□□□□□ -1.07
HERC2-201ENST00000261609 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms