RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 RRP12Q5JTH9 1297 aaKnown RBP7.78□□□□□ -1.16
BRIP1-201ENST00000259008 CHMP4CQ96CF2 233 aa7.78□□□□□ -1.16
BRIP1-201ENST00000259008 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
BRIP1-201ENST00000259008 FAM184AQ8NB25 1140 aa7.78□□□□□ -1.16
BRIP1-201ENST00000259008 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
BRIP1-201ENST00000259008 CCDC158Q5M9N0 1113 aa7.78□□□□□ -1.16
BRIP1-201ENST00000259008 MYCNP04198 464 aaPredicted RBP7.77□□□□□ -1.16
BRIP1-201ENST00000259008 FAM98CQ17RN3 349 aaKnown RBP7.77□□□□□ -1.16
BRIP1-201ENST00000259008 FAM161AQ3B820 660 aa7.77□□□□□ -1.16
BRIP1-201ENST00000259008 MCTP1Q6DN14 999 aa7.77□□□□□ -1.16
BRIP1-201ENST00000259008 TRIM44Q96DX7 344 aaPredicted RBP7.77□□□□□ -1.16
BRIP1-201ENST00000259008 SURF6O75683 361 aaKnown RBP7.77□□□□□ -1.17
BRIP1-201ENST00000259008 FBLN1P23142 703 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 HSP90AB4PQ58FF6 505 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 RUFY2Q8WXA3 655 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 ZFYVE16Q7Z3T8 1539 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 ST5P78524 1137 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
BRIP1-201ENST00000259008 ERC2O15083 957 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 AMOTQ4VCS5 1084 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 ZCRB1Q8TBF4 217 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 FSD1Q9BTV5 496 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 MYD88Q99836 296 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 THUMPD2Q9BTF0 503 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 IBSPP21815 317 aaPredicted RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 TRIM29Q14134 588 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 PANK1Q8TE04 598 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 TRMT112Q9UI30 125 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 NCOA1Q15788 1441 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 SF3A1Q15459 793 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 FOXD4L6Q3SYB3 417 aaPredicted RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 FOXD4L3Q6VB84 417 aaPredicted RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 C6orf229H3BNL8 230 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 MPHOSPH10O00566 681 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 CPLX1O14810 134 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 HTATSF1O43719 755 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 DNTTIP2Q5QJE6 756 aaKnown RBP7.76□□□□□ -1.17
BRIP1-201ENST00000259008 IFNL2Q8IZJ0 200 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 TMOD2Q9NZR1 351 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 RAI14Q9P0K7 980 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 NUP160Q12769 1436 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 PPIP5K1Q6PFW1 1433 aa7.76□□□□□ -1.17
BRIP1-201ENST00000259008 ZBTB3Q9H5J0 574 aa7.75□□□□□ -1.17
BRIP1-201ENST00000259008 C14orf93Q9H972 538 aaKnown RBP7.75□□□□□ -1.17
BRIP1-201ENST00000259008 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
BRIP1-201ENST00000259008 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
BRIP1-201ENST00000259008 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
BRIP1-201ENST00000259008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.75□□□□□ -1.17
BRIP1-201ENST00000259008 MAP4K4O95819 1239 aaPredicted RBP7.75□□□□□ -1.17
BRIP1-201ENST00000259008 NOB1Q9ULX3 412 aaKnown RBP7.75□□□□□ -1.17
BRIP1-201ENST00000259008 PES1O00541 588 aaKnown RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 SLC3A2P08195 630 aaKnown RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 TMEM132AQ24JP5 1023 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 RALYLQ86SE5 291 aaKnown RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 STK32BQ9NY57 414 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 APBA3O96018 575 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 CHMP4BP1P59074 171 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 SRCIN1Q9C0H9 1055 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 ECM2O94769 699 aaPredicted RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 KIAA2012Q0VF49 1180 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 SLKQ9H2G2 1235 aaPredicted RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 ZKSCAN1P17029 563 aaPredicted RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 NBPF6Q5VWK0 638 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 NBPF5PQ86XG9 351 aaPredicted RBP7.74□□□□□ -1.17
BRIP1-201ENST00000259008 EXOC6Q8TAG9 804 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 NBPF4Q96M43 638 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 ORAI2Q96SN7 254 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 SLAIN2Q9P270 581 aa7.74□□□□□ -1.17
BRIP1-201ENST00000259008 GNAI3P08754 354 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 ABCF2Q9UG63 623 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 IL2RBP14784 551 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 ST18O60284 1047 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 METTL24Q5JXM2 366 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 CLASRPQ8N2M8 674 aaKnown RBP7.73□□□□□ -1.17
BRIP1-201ENST00000259008 NOC3LQ8WTT2 800 aaKnown RBP7.73□□□□□ -1.17
BRIP1-201ENST00000259008 LRP2BPQ9P2M1 347 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 RRP1P56182 461 aaKnown RBP7.73□□□□□ -1.17
BRIP1-201ENST00000259008 CPLX2Q6PUV4 134 aaKnown RBP7.73□□□□□ -1.17
BRIP1-201ENST00000259008 CCDC34Q96HJ3 373 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 KIF3AQ9Y496 699 aa7.73□□□□□ -1.17
BRIP1-201ENST00000259008 WDHD1O75717 1129 aaPredicted RBP7.72□□□□□ -1.17
BRIP1-201ENST00000259008 GNAI2P04899 355 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 WDR78Q5VTH9 848 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 ANP32EQ9BTT0 268 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 TAF7Q15545 349 aaPredicted RBP7.72□□□□□ -1.17
BRIP1-201ENST00000259008 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.72□□□□□ -1.173e-6■□□□□ 9.6
BRIP1-201ENST00000259008 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 FCHSD2O94868 740 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 PIP4K2AP48426 406 aaPredicted RBP7.72□□□□□ -1.17
BRIP1-201ENST00000259008 NFE2L2Q16236 605 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 CAVIN4Q5BKX8 364 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
BRIP1-201ENST00000259008 DDX46Q7L014 1031 aaKnown RBP7.72□□□□□ -1.17
BRIP1-201ENST00000259008 A0A087WZG4 1122 aa7.71□□□□□ -1.17
BRIP1-201ENST00000259008 DUSP27Q5VZP5 1158 aa7.71□□□□□ -1.17
BRIP1-201ENST00000259008 SETDB2Q96T68 719 aa7.71□□□□□ -1.17
BRIP1-201ENST00000259008 ATP7AQ04656 1500 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms