RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KIF3BO15066 747 aa14.19□□□□□ -0.14
TROAP-201ENST00000257909 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
TROAP-201ENST00000257909 PPIP5K1Q6PFW1 1433 aa14.19□□□□□ -0.14
TROAP-201ENST00000257909 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
TROAP-201ENST00000257909 CCDC39Q9UFE4 941 aa14.18□□□□□ -0.14
TROAP-201ENST00000257909 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
TROAP-201ENST00000257909 SASS6Q6UVJ0 657 aa14.17□□□□□ -0.14
TROAP-201ENST00000257909 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
TROAP-201ENST00000257909 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
TROAP-201ENST00000257909 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
TROAP-201ENST00000257909 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
TROAP-201ENST00000257909 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
TROAP-201ENST00000257909 LRSAM1Q6UWE0 723 aa14.16□□□□□ -0.14
TROAP-201ENST00000257909 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
TROAP-201ENST00000257909 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
TROAP-201ENST00000257909 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
TROAP-201ENST00000257909 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
TROAP-201ENST00000257909 A0A0U1RQG5 324 aaPredicted RBP14.14□□□□□ -0.15
TROAP-201ENST00000257909 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
TROAP-201ENST00000257909 COL3A1P02461 1466 aaPredicted RBP14.14□□□□□ -0.15
TROAP-201ENST00000257909 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
TROAP-201ENST00000257909 FGD1P98174 961 aa14.13□□□□□ -0.15
TROAP-201ENST00000257909 GPT2Q8TD30 523 aa14.13□□□□□ -0.15
TROAP-201ENST00000257909 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
TROAP-201ENST00000257909 ST18O60284 1047 aa14.12□□□□□ -0.15
TROAP-201ENST00000257909 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
TROAP-201ENST00000257909 MBD3O95983 291 aa14.11□□□□□ -0.15
TROAP-201ENST00000257909 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
TROAP-201ENST00000257909 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
TROAP-201ENST00000257909 PDE4CQ08493 712 aa14.11□□□□□ -0.15
TROAP-201ENST00000257909 INTS3Q68E01 1043 aaKnown RBP14.11□□□□□ -0.15
TROAP-201ENST00000257909 SIGLEC1Q9BZZ2 1709 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 PKP1Q13835 747 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
TROAP-201ENST00000257909 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 GLI2P10070 1586 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 SIRT2Q8IXJ6 389 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 C1orf115Q9H7X2 142 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
TROAP-201ENST00000257909 RBM27Q9P2N5 1060 aaKnown RBP14.1□□□□□ -0.15
TROAP-201ENST00000257909 SYCE3A1L190 88 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 UTP14CQ5TAP6 766 aaKnown RBP14.09□□□□□ -0.15
TROAP-201ENST00000257909 PLEKHM2Q8IWE5 1019 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 MRPL50Q8N5N7 158 aaKnown RBP14.09□□□□□ -0.15
TROAP-201ENST00000257909 TTC22Q5TAA0 569 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 NPATQ14207 1427 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 ABCC4O15439 1325 aa14.09□□□□□ -0.15
TROAP-201ENST00000257909 MYRIPQ8NFW9 859 aa14.08□□□□□ -0.16
TROAP-201ENST00000257909 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
TROAP-201ENST00000257909 TMEM132EQ6IEE7 984 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 ZDHHC9Q9Y397 364 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 VAMP4O75379 141 aa14.07□□□□□ -0.16
TROAP-201ENST00000257909 PTMAP06454 111 aaKnown RBP14.07□□□□□ -0.16
TROAP-201ENST00000257909 FCHSD2O94868 740 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
TROAP-201ENST00000257909 ZGPATQ8N5A5 531 aaKnown RBP14.06□□□□□ -0.16
TROAP-201ENST00000257909 SYAP1Q96A49 352 aaPredicted RBP14.06□□□□□ -0.16
TROAP-201ENST00000257909 RPGRIP1LQ68CZ1 1315 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 YEATS2Q9ULM3 1422 aa14.06□□□□□ -0.16
TROAP-201ENST00000257909 REC8O95072 547 aa14.05□□□□□ -0.16
TROAP-201ENST00000257909 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
TROAP-201ENST00000257909 DMTNQ08495 405 aa14.05□□□□□ -0.16
TROAP-201ENST00000257909 TSPY26PQ9H489 355 aa14.05□□□□□ -0.16
TROAP-201ENST00000257909 A0A1W2PP64 1363 aa14.05□□□□□ -0.16
TROAP-201ENST00000257909 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
TROAP-201ENST00000257909 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
TROAP-201ENST00000257909 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
TROAP-201ENST00000257909 PHF14O94880 888 aa14.04□□□□□ -0.16
TROAP-201ENST00000257909 DNTTIP2Q5QJE6 756 aaKnown RBP14.04□□□□□ -0.16
TROAP-201ENST00000257909 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
TROAP-201ENST00000257909 PIK3C2BO00750 1634 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 GTF2F1P35269 517 aaKnown RBP eCLIP14.03□□□□□ -0.16
TROAP-201ENST00000257909 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
TROAP-201ENST00000257909 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 GNAI1P63096 354 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 FAM184AQ8NB25 1140 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 RNF214Q8ND24 703 aa14.03□□□□□ -0.16
TROAP-201ENST00000257909 NSFL1CQ9UNZ2 370 aaKnown RBP14.03□□□□□ -0.16
TROAP-201ENST00000257909 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.16
TROAP-201ENST00000257909 MCM2P49736 904 aa14.02□□□□□ -0.16
TROAP-201ENST00000257909 UVSSAQ2YD98 709 aa14.02□□□□□ -0.16
TROAP-201ENST00000257909 ARID3AQ99856 593 aa14.02□□□□□ -0.16
TROAP-201ENST00000257909 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 ZFYVE9O95405 1425 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 FAM135BQ49AJ0 1406 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 MYO5BQ9ULV0 1848 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 IFT57Q9NWB7 429 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 ABCC3O15438 1527 aa14.02□□□□□ -0.17
TROAP-201ENST00000257909 FYB1O15117 783 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms