RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 EIF2S2P20042 333 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 NUDT16Q96DE0 195 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 CHMP4AQ9BY43 222 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 MCM10Q7L590 875 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-201ENST00000257414 GNAI2P04899 355 aa12.27□□□□□ -0.44
SEMA6A-201ENST00000257414 GNAI3P08754 354 aa12.27□□□□□ -0.44
SEMA6A-201ENST00000257414 DRC7Q8IY82 874 aa12.27□□□□□ -0.44
SEMA6A-201ENST00000257414 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.44
SEMA6A-201ENST00000257414 SNX21Q969T3 373 aa12.27□□□□□ -0.45
SEMA6A-201ENST00000257414 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
SEMA6A-201ENST00000257414 ZRSR1Q15695 479 aaKnown RBP12.27□□□□□ -0.45
SEMA6A-201ENST00000257414 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
SEMA6A-201ENST00000257414 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 LAMC1P11047 1609 aa12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 MBD3O95983 291 aa12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
SEMA6A-201ENST00000257414 VAMP4O75379 141 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 MCM2P49736 904 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 USP19O94966 1318 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 MADDQ8WXG6 1647 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 ATP6V1DQ9Y5K8 247 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 MYOM2P54296 1465 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 E9PCH4 1651 aa12.25□□□□□ -0.45
SEMA6A-201ENST00000257414 CLTCL1P53675 1640 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 C8orf58Q8NAV2 365 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
SEMA6A-201ENST00000257414 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 TEFQ10587 303 aa12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 RBM25P49756 843 aaKnown RBP12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 NLRP6P59044 892 aa12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
SEMA6A-201ENST00000257414 F6X3S4 739 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 ZBTB7BO15156 539 aaPredicted RBP12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 TPM2P07951 284 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 NPATQ14207 1427 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 RAB3GAP1Q15042 981 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 ZSCAN30Q86W11 494 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 CLCN1P35523 988 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
SEMA6A-201ENST00000257414 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 TET3O43151 1660 aa12.21□□□□□ -0.45
SEMA6A-201ENST00000257414 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.46
SEMA6A-201ENST00000257414 KLHL40Q2TBA0 621 aa12.21□□□□□ -0.46
SEMA6A-201ENST00000257414 KIF1BO60333 1816 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 CHD1O14646 1710 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 TSPY26PQ9H489 355 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 CHMP3Q9Y3E7 222 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 SYCE3A1L190 88 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 GOLGA6L6A8MZA4 724 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 SDSP20132 328 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 MEIS3Q99687 375 aa12.2□□□□□ -0.46
SEMA6A-201ENST00000257414 HDGFL1Q5TGJ6 251 aa12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms