RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
PUM1-201ENST00000257075 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
PUM1-201ENST00000257075 FCHSD2O94868 740 aa12.8□□□□□ -0.36
PUM1-201ENST00000257075 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
PUM1-201ENST00000257075 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
PUM1-201ENST00000257075 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
PUM1-201ENST00000257075 KIF14Q15058 1648 aa12.8□□□□□ -0.36
PUM1-201ENST00000257075 RFC4P35249 363 aa12.79□□□□□ -0.36
PUM1-201ENST00000257075 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
PUM1-201ENST00000257075 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
PUM1-201ENST00000257075 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
PUM1-201ENST00000257075 TEX13AQ9BXU3 409 aaPredicted RBP12.79□□□□□ -0.36
PUM1-201ENST00000257075 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
PUM1-201ENST00000257075 SMC3Q9UQE7 1217 aa12.79□□□□□ -0.36
PUM1-201ENST00000257075 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
PUM1-201ENST00000257075 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
PUM1-201ENST00000257075 CAVIN4Q5BKX8 364 aa12.78□□□□□ -0.36
PUM1-201ENST00000257075 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
PUM1-201ENST00000257075 POLD1P28340 1107 aa12.78□□□□□ -0.36
PUM1-201ENST00000257075 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
PUM1-201ENST00000257075 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
PUM1-201ENST00000257075 DHX29Q7Z478 1369 aaKnown RBP12.78□□□□□ -0.36
PUM1-201ENST00000257075 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
PUM1-201ENST00000257075 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
PUM1-201ENST00000257075 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
PUM1-201ENST00000257075 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.36
PUM1-201ENST00000257075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
PUM1-201ENST00000257075 FOSBP53539 338 aa12.77□□□□□ -0.37
PUM1-201ENST00000257075 BICD2Q8TD16 824 aa12.77□□□□□ -0.37
PUM1-201ENST00000257075 PANK1Q8TE04 598 aa12.77□□□□□ -0.37
PUM1-201ENST00000257075 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.37
PUM1-201ENST00000257075 NME9Q86XW9 330 aa12.77□□□□□ -0.37
PUM1-201ENST00000257075 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
PUM1-201ENST00000257075 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.373e-8■■□□□ 11.6
PUM1-201ENST00000257075 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
PUM1-201ENST00000257075 A0A087WZG4 1122 aa12.76□□□□□ -0.37
PUM1-201ENST00000257075 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
PUM1-201ENST00000257075 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
PUM1-201ENST00000257075 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
PUM1-201ENST00000257075 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
PUM1-201ENST00000257075 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
PUM1-201ENST00000257075 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
PUM1-201ENST00000257075 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
PUM1-201ENST00000257075 CDK5RAP3Q96JB5 506 aa12.76□□□□□ -0.37
PUM1-201ENST00000257075 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
PUM1-201ENST00000257075 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
PUM1-201ENST00000257075 CUL7Q14999 1698 aa12.75□□□□□ -0.37
PUM1-201ENST00000257075 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
PUM1-201ENST00000257075 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
PUM1-201ENST00000257075 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
PUM1-201ENST00000257075 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
PUM1-201ENST00000257075 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
PUM1-201ENST00000257075 STK11IPQ8N1F8 1099 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 DDB1Q16531 1140 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 TDO2P48775 406 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 CT47A1Q5JQC4 288 aaPredicted RBP12.74□□□□□ -0.37
PUM1-201ENST00000257075 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 KDM4AO75164 1064 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 CDC45O75419 566 aa12.74□□□□□ -0.37
PUM1-201ENST00000257075 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 ST5P78524 1137 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
PUM1-201ENST00000257075 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
PUM1-201ENST00000257075 ANKRD24Q8TF21 1146 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
PUM1-201ENST00000257075 EPS15P42566 896 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
PUM1-201ENST00000257075 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
PUM1-201ENST00000257075 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 IDH1O75874 414 aaKnown RBP12.72□□□□□ -0.37
PUM1-201ENST00000257075 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
PUM1-201ENST00000257075 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 ADGRF5Q8IZF2 1346 aa12.72□□□□□ -0.37
PUM1-201ENST00000257075 TXLNAP40222 546 aa12.71□□□□□ -0.37
PUM1-201ENST00000257075 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
PUM1-201ENST00000257075 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
PUM1-201ENST00000257075 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
PUM1-201ENST00000257075 AACSQ86V21 672 aa12.71□□□□□ -0.37
PUM1-201ENST00000257075 USP5P45974 858 aa12.71□□□□□ -0.37
PUM1-201ENST00000257075 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
PUM1-201ENST00000257075 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.38
PUM1-201ENST00000257075 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.38
PUM1-201ENST00000257075 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 DDX11L8A8MPP1 907 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 MCM10Q7L590 875 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
PUM1-201ENST00000257075 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
PUM1-201ENST00000257075 ACEP12821 1306 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 MYD88Q99836 296 aa12.7□□□□□ -0.38
PUM1-201ENST00000257075 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms