RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
RPA1-201ENST00000254719 CRB1P82279 1406 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
RPA1-201ENST00000254719 TXNDC2Q86VQ3 553 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 NGEFQ8N5V2 710 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
RPA1-201ENST00000254719 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
RPA1-201ENST00000254719 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
RPA1-201ENST00000254719 FAM83GA6ND36 823 aa11.83□□□□□ -0.52
RPA1-201ENST00000254719 USP6P35125 1406 aa11.83□□□□□ -0.52
RPA1-201ENST00000254719 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 VAMP4O75379 141 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 TRPM3Q9HCF6 1732 aaPredicted RBP11.82□□□□□ -0.52
RPA1-201ENST00000254719 KIF2CQ99661 725 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
RPA1-201ENST00000254719 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
RPA1-201ENST00000254719 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
RPA1-201ENST00000254719 AEBP1Q8IUX7 1158 aa11.82□□□□□ -0.52
RPA1-201ENST00000254719 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
RPA1-201ENST00000254719 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPA1-201ENST00000254719 IL16Q14005 1332 aa11.81□□□□□ -0.52
RPA1-201ENST00000254719 NFAT5O94916 1531 aa11.81□□□□□ -0.52
RPA1-201ENST00000254719 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
RPA1-201ENST00000254719 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
RPA1-201ENST00000254719 RRS1Q15050 365 aaKnown RBP11.8□□□□□ -0.52
RPA1-201ENST00000254719 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
RPA1-201ENST00000254719 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
RPA1-201ENST00000254719 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
RPA1-201ENST00000254719 TNRQ92752 1358 aa11.8□□□□□ -0.52
RPA1-201ENST00000254719 DDIT3P35638 169 aa11.79□□□□□ -0.52
RPA1-201ENST00000254719 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
RPA1-201ENST00000254719 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
RPA1-201ENST00000254719 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
RPA1-201ENST00000254719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.523e-6■■■■□ 24.2
RPA1-201ENST00000254719 C8orf58Q8NAV2 365 aa11.79□□□□□ -0.52
RPA1-201ENST00000254719 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
RPA1-201ENST00000254719 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
RPA1-201ENST00000254719 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 GLI3P10071 1580 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 MLECQ14165 292 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
RPA1-201ENST00000254719 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 KDRP35968 1356 aa11.78□□□□□ -0.52
RPA1-201ENST00000254719 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.52
RPA1-201ENST00000254719 PRKAR2BP31323 418 aa11.77□□□□□ -0.52
RPA1-201ENST00000254719 ABCC4O15439 1325 aa11.77□□□□□ -0.52
RPA1-201ENST00000254719 HMOX1P09601 288 aa11.77□□□□□ -0.53
RPA1-201ENST00000254719 DCTN1Q14203 1278 aa11.77□□□□□ -0.53
RPA1-201ENST00000254719 FCHSD2O94868 740 aa11.77□□□□□ -0.53
RPA1-201ENST00000254719 RIPK4P57078 832 aa11.77□□□□□ -0.53
RPA1-201ENST00000254719 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.53
RPA1-201ENST00000254719 RGS3P49796 1198 aa11.76□□□□□ -0.53
RPA1-201ENST00000254719 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
RPA1-201ENST00000254719 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
RPA1-201ENST00000254719 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
RPA1-201ENST00000254719 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
RPA1-201ENST00000254719 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
RPA1-201ENST00000254719 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
RPA1-201ENST00000254719 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
RPA1-201ENST00000254719 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
RPA1-201ENST00000254719 ACEP12821 1306 aa11.74□□□□□ -0.53
RPA1-201ENST00000254719 COL18A1P39060 1754 aa11.73□□□□□ -0.53
RPA1-201ENST00000254719 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
RPA1-201ENST00000254719 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
RPA1-201ENST00000254719 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
RPA1-201ENST00000254719 PPM1GO15355 546 aaPredicted RBP11.73□□□□□ -0.53
RPA1-201ENST00000254719 CD2BP2O95400 341 aaKnown RBP11.73□□□□□ -0.53
RPA1-201ENST00000254719 FOXO3O43524 673 aa11.73□□□□□ -0.53
RPA1-201ENST00000254719 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
RPA1-201ENST00000254719 NFE2L2Q16236 605 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 NCAPD2Q15021 1401 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
RPA1-201ENST00000254719 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
RPA1-201ENST00000254719 MSH6P52701 1360 aa11.71□□□□□ -0.53
RPA1-201ENST00000254719 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
RPA1-201ENST00000254719 BECN1Q14457 450 aa11.71□□□□□ -0.53
RPA1-201ENST00000254719 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
RPA1-201ENST00000254719 POGKQ9P215 609 aa11.71□□□□□ -0.53
RPA1-201ENST00000254719 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.54
RPA1-201ENST00000254719 C5P01031 1676 aa11.7□□□□□ -0.54
RPA1-201ENST00000254719 NUCB1Q02818 461 aa11.7□□□□□ -0.54
RPA1-201ENST00000254719 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
RPA1-201ENST00000254719 SETD1BQ9UPS6 1966 aaKnown RBP11.7□□□□□ -0.54
RPA1-201ENST00000254719 EP400Q96L91 3159 aa11.7□□□□□ -0.54
RPA1-201ENST00000254719 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
RPA1-201ENST00000254719 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
RPA1-201ENST00000254719 CHL1O00533 1208 aa11.69□□□□□ -0.54
RPA1-201ENST00000254719 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
RPA1-201ENST00000254719 GSPT1P15170 499 aaKnown RBP11.68□□□□□ -0.54
RPA1-201ENST00000254719 ZKSCAN2Q63HK3 967 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms