RNA–Protein interactions for RNA: ENST00000254271.8

LRRC9-201, Transcript of leucine rich repeat containing 9, humanhuman

TSL 2

Gene LRRC9, Length 4,915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-201ENST00000254271 CAMKK2Q96RR4 588 aa3.76□□□□□ -1.81
LRRC9-201ENST00000254271 ECM29Q5VYK3 1845 aa3.76□□□□□ -1.81
LRRC9-201ENST00000254271 RRP7BPQ9NSQ0 103 aa3.76□□□□□ -1.81
LRRC9-201ENST00000254271 USP31Q70CQ4 1352 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 NBEAQ8NFP9 2946 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 ALPK3Q96L96 1907 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 NSD3Q9BZ95 1437 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 USP6P35125 1406 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 C19orf44Q9H6X5 657 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 RELNP78509 3460 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 TXNDC2Q86VQ3 553 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 AMOTL2Q9Y2J4 779 aa3.75□□□□□ -1.81
LRRC9-201ENST00000254271 PXDNLA1KZ92 1463 aa3.74□□□□□ -1.81
LRRC9-201ENST00000254271 CCDC144AA2RUR9 1427 aa3.74□□□□□ -1.81
LRRC9-201ENST00000254271 SCN9AQ15858 1988 aa3.74□□□□□ -1.81
LRRC9-201ENST00000254271 DUOX1Q9NRD9 1551 aa3.74□□□□□ -1.81
LRRC9-201ENST00000254271 FRYQ5TBA9 3013 aa3.74□□□□□ -1.81
LRRC9-201ENST00000254271 FAM83GA6ND36 823 aa3.73□□□□□ -1.81
LRRC9-201ENST00000254271 SLC4A1APQ9BWU0 796 aaKnown RBP3.73□□□□□ -1.81
LRRC9-201ENST00000254271 AFF2P51816 1311 aa3.73□□□□□ -1.81
LRRC9-201ENST00000254271 CDK11AQ9UQ88 783 aaPredicted RBP3.73□□□□□ -1.81
LRRC9-201ENST00000254271 KDRP35968 1356 aa3.73□□□□□ -1.81
LRRC9-201ENST00000254271 FREM2Q5SZK8 3169 aa3.73□□□□□ -1.81
LRRC9-201ENST00000254271 CDK5RAP2Q96SN8 1893 aa3.73□□□□□ -1.81
LRRC9-201ENST00000254271 SPATA31A5Q5VU36 1347 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 SPATA31A7Q8IWB4 1347 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 ARAP2Q8WZ64 1704 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 TRPM7Q96QT4 1865 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 FAM9AQ8IZU1 332 aaPredicted RBP3.72□□□□□ -1.81
LRRC9-201ENST00000254271 AXIN2Q9Y2T1 843 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 TNS2Q63HR2 1409 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 ACIN1Q9UKV3 1341 aaKnown RBP3.72□□□□□ -1.81
LRRC9-201ENST00000254271 TESK2Q96S53 571 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 ARID4BQ4LE39 1312 aaPredicted RBP3.72□□□□□ -1.81
LRRC9-201ENST00000254271 OTOFQ9HC10 1997 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 SLX4Q8IY92 1834 aa3.72□□□□□ -1.81
LRRC9-201ENST00000254271 EIF3AQ14152 1382 aaKnown RBP3.71□□□□□ -1.81
LRRC9-201ENST00000254271 ANO8Q9HCE9 1232 aaPredicted RBP3.71□□□□□ -1.82
LRRC9-201ENST00000254271 RAB3GAP2Q9H2M9 1393 aa3.71□□□□□ -1.82
LRRC9-201ENST00000254271 MSH6P52701 1360 aa3.71□□□□□ -1.82
LRRC9-201ENST00000254271 TOM1O60784 492 aa3.71□□□□□ -1.82
LRRC9-201ENST00000254271 POLR2AP24928 1970 aaKnown RBP3.7□□□□□ -1.82
LRRC9-201ENST00000254271 CELSR3Q9NYQ7 3312 aa3.7□□□□□ -1.82
LRRC9-201ENST00000254271 SPATA31A1Q5TZJ5 1347 aa3.7□□□□□ -1.82
LRRC9-201ENST00000254271 PLEKHG3A1L390 1219 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 VPS72Q15906 364 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 RPGRIP1LQ68CZ1 1315 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 PTPRFP10586 1907 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 WAPLQ7Z5K2 1190 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 PARP14Q460N5 1801 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 ATAD2Q6PL18 1390 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 HRCP23327 699 aa3.69□□□□□ -1.82
LRRC9-201ENST00000254271 C1QBPQ07021 282 aaKnown RBP3.69□□□□□ -1.82
LRRC9-201ENST00000254271 SCN4AP35499 1836 aa3.68□□□□□ -1.82
LRRC9-201ENST00000254271 PLXNB2O15031 1838 aa3.68□□□□□ -1.82
LRRC9-201ENST00000254271 ATG2AQ2TAZ0 1938 aa3.68□□□□□ -1.82
LRRC9-201ENST00000254271 PRELPP51888 382 aa3.68□□□□□ -1.82
LRRC9-201ENST00000254271 FOCADQ5VW36 1801 aa3.68□□□□□ -1.82
LRRC9-201ENST00000254271 GJD4Q96KN9 370 aaPredicted RBP3.67□□□□□ -1.82
LRRC9-201ENST00000254271 LRRC4BQ9NT99 713 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 FRMPD3Q5JV73 1810 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 OVOS2A0A0G2JMS6 1433 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 MYH3P11055 1940 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 NBPF8Q3BBV2 869 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 ZSWIM8A7E2V4 1837 aa3.67□□□□□ -1.82
LRRC9-201ENST00000254271 MGAQ8IWI9 3026 aa3.66□□□□□ -1.82
LRRC9-201ENST00000254271 SIPA1L1O43166 1804 aa3.66□□□□□ -1.82
LRRC9-201ENST00000254271 ZNF777Q9ULD5 760 aaPredicted RBP3.66□□□□□ -1.82
LRRC9-201ENST00000254271 DNAJC5GQ8N7S2 189 aa3.66□□□□□ -1.82
LRRC9-201ENST00000254271 LOC285556D6RIA3 1793 aa3.65□□□□□ -1.82
LRRC9-201ENST00000254271 CADPS2Q86UW7 1296 aa3.65□□□□□ -1.82
LRRC9-201ENST00000254271 PARD3Q8TEW0 1356 aa3.65□□□□□ -1.82
LRRC9-201ENST00000254271 PLEKHG2Q9H7P9 1386 aa3.65□□□□□ -1.82
LRRC9-201ENST00000254271 BARGINQ6ZT62 677 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 AKT1S1Q96B36 256 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 UBTFP17480 764 aaKnown RBP3.65□□□□□ -1.83
LRRC9-201ENST00000254271 RBM6P78332 1123 aaKnown RBP3.65□□□□□ -1.83
LRRC9-201ENST00000254271 DEFB132Q7Z7B7 95 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 C10orf71Q711Q0 1435 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 SLC4A9Q96Q91 983 aa3.65□□□□□ -1.83
LRRC9-201ENST00000254271 SPEF2Q9C093 1822 aa3.64□□□□□ -1.83
LRRC9-201ENST00000254271 CRB1P82279 1406 aa3.64□□□□□ -1.83
LRRC9-201ENST00000254271 NBPF1Q3BBV0 1214 aa3.64□□□□□ -1.83
LRRC9-201ENST00000254271 CFAP70Q5T0N1 1121 aa3.64□□□□□ -1.83
LRRC9-201ENST00000254271 ERBB3P21860 1342 aa3.64□□□□□ -1.83
LRRC9-201ENST00000254271 MYO5AQ9Y4I1 1855 aaKnown RBP3.64□□□□□ -1.83
LRRC9-201ENST00000254271 BPTFQ12830 3046 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 ATMQ13315 3056 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 KCNA4P22459 653 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 PIP4K2BP78356 416 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 MARCH10Q8NA82 808 aaPredicted RBP3.63□□□□□ -1.83
LRRC9-201ENST00000254271 NPC1L1Q9UHC9 1359 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 NUTM2DQ5VT03 806 aaPredicted RBP3.63□□□□□ -1.83
LRRC9-201ENST00000254271 MPHOSPH9Q99550 1183 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 RLFQ13129 1914 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 BRD4O60885 1362 aaPredicted RBP3.63□□□□□ -1.83
LRRC9-201ENST00000254271 KCNA3P22001 575 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 RANGAP1P46060 587 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms